Strain Fitness in Shewanella oneidensis MR-1 around SO1301

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,353,380	+				-0.8
1,353,407	+				-1.8
1,353,510	-	pyrB	SO1301	0.19	-0.2
1,353,533	-	pyrB	SO1301	0.21	+0.5
1,353,543	-	pyrB	SO1301	0.22	+0.6
1,353,673	+	pyrB	SO1301	0.35	-2.3
1,353,767	+	pyrB	SO1301	0.44	+0.7
1,353,775	-	pyrB	SO1301	0.45	-0.4
1,353,775	-	pyrB	SO1301	0.45	+0.6
1,353,885	+	pyrB	SO1301	0.55	-0.4
1,353,998	-	pyrB	SO1301	0.66	-0.8
1,354,012	+	pyrB	SO1301	0.68	-0.3
1,354,098	+	pyrB	SO1301	0.76	+0.1
1,354,113	-	pyrB	SO1301	0.78	+1.5
1,354,137	+	pyrB	SO1301	0.80	+0.8
1,354,183	+	pyrB	SO1301	0.85	+1.3
1,354,227	-	pyrB	SO1301	0.89	-0.2
1,354,240	+				-0.1
1,354,246	-				+0.7
1,354,248	-				-0.0
1,354,332	-				+0.8
1,354,402	-				+0.5
1,354,447	-				+0.6
1,354,457	-				+0.2
1,354,460	+				+0.7
1,354,461	+				+0.1
1,354,516	-				+0.3
1,354,537	+				-0.5
1,354,540	-				+0.2
1,354,545	-				-0.7
1,354,545	-				-1.1
1,354,550	-				+0.2
1,354,551	-				+0.7
1,354,557	+				+1.7
1,354,626	+				+0.1
1,354,667	+				+1.0
1,354,672	+				-1.1
1,354,672	+				+0.3
1,354,677	+				-1.4
1,354,680	-				+0.1
1,354,680	-				-2.5
1,354,680	-				+0.5
1,354,685	-				+0.1
1,354,717	+				-0.3
1,354,747	+		SO1302	0.11	-0.7
1,354,753	-		SO1302	0.11	+0.1
1,354,767	+		SO1302	0.12	+0.1
1,354,770	-		SO1302	0.12	-0.4
1,354,810	-		SO1302	0.15	+1.0
1,354,844	-		SO1302	0.17	-1.3
1,354,885	-		SO1302	0.19	+0.7
1,354,943	+		SO1302	0.22	+1.0
1,355,172	-		SO1302	0.36	+0.7
1,355,182	-		SO1302	0.36	-0.6
1,355,182	-		SO1302	0.36	+0.0
1,355,189	+		SO1302	0.37	-1.7
1,355,189	+		SO1302	0.37	+1.0
1,355,203	-		SO1302	0.37	-1.6
1,355,308	-		SO1302	0.43	+1.8