Strain Fitness in Shewanella oneidensis MR-1 around SO1049

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,085,745	+		SO1048	0.18	+0.6
1,085,753	-		SO1048	0.19	-0.5
1,085,753	-		SO1048	0.19	-0.1
1,085,805	-		SO1048	0.26	+0.5
1,085,857	+		SO1048	0.33	+0.1
1,085,911	-		SO1048	0.41	+0.1
1,085,973	+		SO1048	0.49	+0.5
1,085,973	+		SO1048	0.49	+0.1
1,085,980	-		SO1048	0.50	-0.2
1,086,124	-		SO1048	0.70	-1.1
1,086,246	+		SO1048	0.86	-0.3
1,086,308	+				-1.0
1,086,308	+				+1.5
1,086,471	-				+0.6
1,086,482	+				+0.6
1,086,557	+				+0.1
1,086,647	+				-0.2
1,086,662	-				-0.8
1,086,662	-				+1.0
1,086,793	-		SO1049	0.10	+1.2
1,086,976	-		SO1049	0.48	+0.4
1,087,032	-		SO1049	0.60	+0.5
1,087,079	+		SO1049	0.70	-0.2
1,087,087	-		SO1049	0.72	+1.8
1,087,087	-		SO1049	0.72	+0.1
1,087,087	-		SO1049	0.72	+0.1
1,087,087	-		SO1049	0.72	-1.1
1,087,110	+		SO1049	0.77	+2.0
1,087,213	-				-2.1
1,087,213	-				-0.3
1,087,314	-				+0.1
1,087,398	-				-0.6
1,087,405	+				-0.7
1,087,427	+				-0.6
1,087,427	+				+0.3
1,087,435	-				+0.4
1,087,435	-				-0.2
1,087,469	+		SO1050	0.33	-0.9
1,087,606	+				-0.2
1,087,705	-				+1.1
1,087,705	-				+0.0
1,087,712	+				-0.3
1,087,818	+				-0.9
1,087,897	+		SO1051	0.13	-0.8
1,087,897	+		SO1051	0.13	+1.1
1,087,905	-		SO1051	0.13	-0.6
1,087,952	+		SO1051	0.16	+0.0
1,088,127	+		SO1051	0.25	-0.7
1,088,147	-		SO1051	0.27	-0.2