Strain Fitness in Shewanella oneidensis MR-1 around SO1010

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
1,045,781	+	nuoN	SO1009	0.34	-2.0
1,045,878	-	nuoN	SO1009	0.41	-0.9
1,046,047	+	nuoN	SO1009	0.52	-1.3
1,046,065	+	nuoN	SO1009	0.54	-0.2
1,046,153	-	nuoN	SO1009	0.60	-1.6
1,046,189	+	nuoN	SO1009	0.62	-0.6
1,046,217	-	nuoN	SO1009	0.64	-0.5
1,046,232	+	nuoN	SO1009	0.65	-1.1
1,046,232	-	nuoN	SO1009	0.65	-2.6
1,046,399	-	nuoN	SO1009	0.76	-0.3
1,046,461	+	nuoN	SO1009	0.81	-0.5
1,046,478	+	nuoN	SO1009	0.82	-2.0
1,046,479	-	nuoN	SO1009	0.82	-1.2
1,046,499	+	nuoN	SO1009	0.83	-1.5
1,046,535	-	nuoN	SO1009	0.86	-2.2
1,046,915	-	nuoM	SO1010	0.11	-0.5
1,046,915	-	nuoM	SO1010	0.11	-0.4
1,046,955	+	nuoM	SO1010	0.14	-1.1
1,046,961	+	nuoM	SO1010	0.14	-0.5
1,047,116	+	nuoM	SO1010	0.24	-1.1
1,047,190	+	nuoM	SO1010	0.29	+0.2
1,047,240	+	nuoM	SO1010	0.32	-2.1
1,047,245	+	nuoM	SO1010	0.33	-2.3
1,047,360	+	nuoM	SO1010	0.40	-1.3
1,047,516	+	nuoM	SO1010	0.50	-1.5
1,047,516	-	nuoM	SO1010	0.50	-2.4
1,047,599	+	nuoM	SO1010	0.56	-1.6
1,047,632	-	nuoM	SO1010	0.58	-2.0
1,047,634	+	nuoM	SO1010	0.58	-1.8
1,047,642	-	nuoM	SO1010	0.58	-1.6
1,047,761	-	nuoM	SO1010	0.66	-0.4
1,047,809	-				-1.8
1,048,096	+				-0.8
1,048,160	-				+0.2
1,048,184	+				-2.9
1,048,189	+				+0.2
1,048,197	-				-2.0
1,048,350	+				-1.8
1,048,350	+				-2.0
1,048,494	+				-0.8
1,048,494	+				+0.3
1,048,533	+				-0.4
1,048,574	+	nuoL	SO1011	0.10	+1.3
1,048,582	-	nuoL	SO1011	0.11	-0.1
1,048,595	-	nuoL	SO1011	0.11	+0.3
1,048,625	+	nuoL	SO1011	0.13	+0.0
1,048,811	+	nuoL	SO1011	0.23	+0.9
1,048,939	+	nuoL	SO1011	0.30	-0.5
1,048,940	+	nuoL	SO1011	0.30	-0.7
1,048,940	+	nuoL	SO1011	0.30	+0.6
1,048,948	-	nuoL	SO1011	0.31	+2.1
1,048,976	+	nuoL	SO1011	0.32	+0.2
1,048,976	+	nuoL	SO1011	0.32	+1.2
1,048,976	+	nuoL	SO1011	0.32	-0.7
1,048,976	+	nuoL	SO1011	0.32	-0.4
1,048,976	+	nuoL	SO1011	0.32	-0.2
1,048,976	+	nuoL	SO1011	0.32	+0.1
1,048,976	+	nuoL	SO1011	0.32	+1.0
1,048,984	-	nuoL	SO1011	0.32	-0.9
1,048,984	-	nuoL	SO1011	0.32	+0.4
1,048,984	-	nuoL	SO1011	0.32	+0.4
1,049,249	+	nuoL	SO1011	0.47	-1.1