Strain Fitness in Marinobacter adhaerens HP15 around HP15_1443

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1442 and HP15_1443 are separated by 195 nucleotidesHP15_1443 and HP15_1444 are separated by 281 nucleotides HP15_1442: HP15_1442 - membrane protein, at 1,518,384 to 1,518,932 _1442 HP15_1443: HP15_1443 - conserved hypothetical protein, at 1,519,128 to 1,519,475 _1443 HP15_1444: HP15_1444 - conserved hypothetical protein, at 1,519,757 to 1,520,683 _1444 Position (kb) 1519 1520Strain fitness (log2 ratio) -1 0 1 2at 1518.209 kb on + strandat 1518.217 kb on + strandat 1518.232 kb on + strandat 1518.232 kb on + strandat 1518.232 kb on + strandat 1518.232 kb on + strandat 1518.232 kb on + strandat 1518.235 kb on - strandat 1518.240 kb on - strandat 1518.240 kb on - strandat 1518.240 kb on - strandat 1518.240 kb on - strandat 1518.240 kb on - strandat 1518.240 kb on - strandat 1518.242 kb on + strandat 1518.268 kb on - strandat 1518.292 kb on - strandat 1518.619 kb on - strand, within HP15_1442at 1518.779 kb on - strand, within HP15_1442at 1518.913 kb on + strandat 1518.921 kb on - strandat 1519.053 kb on + strandat 1519.168 kb on - strand, within HP15_1443at 1519.168 kb on - strand, within HP15_1443at 1519.252 kb on - strand, within HP15_1443at 1519.259 kb on + strand, within HP15_1443at 1519.332 kb on - strand, within HP15_1443at 1519.439 kb on + strand, within HP15_1443at 1519.621 kb on - strandat 1519.665 kb on - strandat 1519.679 kb on + strandat 1519.727 kb on + strandat 1519.750 kb on + strandat 1519.778 kb on + strandat 1519.799 kb on + strandat 1519.799 kb on + strandat 1519.812 kb on + strandat 1519.826 kb on - strandat 1519.914 kb on - strand, within HP15_1444at 1519.940 kb on - strand, within HP15_1444at 1519.954 kb on - strand, within HP15_1444at 1520.040 kb on - strand, within HP15_1444at 1520.211 kb on - strand, within HP15_1444at 1520.262 kb on + strand, within HP15_1444at 1520.283 kb on + strand, within HP15_1444at 1520.283 kb on + strand, within HP15_1444at 1520.291 kb on - strand, within HP15_1444at 1520.304 kb on + strand, within HP15_1444

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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1,518,209 + -0.4
1,518,217 + -0.0
1,518,232 + -0.2
1,518,232 + +0.5
1,518,232 + +0.8
1,518,232 + -0.0
1,518,232 + +0.5
1,518,235 - -1.0
1,518,240 - -0.5
1,518,240 - -0.2
1,518,240 - -0.3
1,518,240 - -0.3
1,518,240 - -0.6
1,518,240 - +0.3
1,518,242 + +0.6
1,518,268 - +0.2
1,518,292 - +1.9
1,518,619 - HP15_1442 0.43 -0.2
1,518,779 - HP15_1442 0.72 +1.5
1,518,913 + -0.7
1,518,921 - +0.4
1,519,053 + +0.4
1,519,168 - HP15_1443 0.11 +0.3
1,519,168 - HP15_1443 0.11 +0.3
1,519,252 - HP15_1443 0.36 +0.5
1,519,259 + HP15_1443 0.38 +0.0
1,519,332 - HP15_1443 0.59 -0.5
1,519,439 + HP15_1443 0.89 -0.2
1,519,621 - -0.2
1,519,665 - +0.5
1,519,679 + -0.2
1,519,727 + -0.3
1,519,750 + +0.3
1,519,778 + -0.8
1,519,799 + -0.2
1,519,799 + -0.4
1,519,812 + +0.0
1,519,826 - +1.3
1,519,914 - HP15_1444 0.17 +0.2
1,519,940 - HP15_1444 0.20 -0.2
1,519,954 - HP15_1444 0.21 +0.7
1,520,040 - HP15_1444 0.31 +0.4
1,520,211 - HP15_1444 0.49 +0.2
1,520,262 + HP15_1444 0.54 +0.3
1,520,283 + HP15_1444 0.57 +0.3
1,520,283 + HP15_1444 0.57 +1.2
1,520,291 - HP15_1444 0.58 -0.1
1,520,304 + HP15_1444 0.59 +0.2

Or see this region's nucleotide sequence