Strain Fitness in Shewanella amazonensis SB2B around Sama_3527

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
4,160,384	+				+1.7
4,160,384	+				-2.3
4,160,384	+				-1.1
4,160,385	-				+0.6
4,160,385	-				+1.3
4,160,385	-				-0.1
4,160,385	-				+1.8
4,160,385	-				-1.8
4,160,429	+		Sama_3525	0.15	-0.1
4,160,429	+		Sama_3525	0.15	-1.2
4,160,429	+		Sama_3525	0.15	+0.1
4,160,430	-		Sama_3525	0.16	+3.1
4,160,430	-		Sama_3525	0.16	+0.7
4,160,430	-		Sama_3525	0.16	-0.3
4,160,430	-		Sama_3525	0.16	+0.3
4,160,430	-		Sama_3525	0.16	+1.2
4,160,430	-		Sama_3525	0.16	-0.9
4,160,430	-		Sama_3525	0.16	+1.4
4,160,430	-		Sama_3525	0.16	-0.5
4,160,496	-		Sama_3525	0.28	+1.6
4,160,511	+		Sama_3525	0.31	-2.1
4,160,511	+		Sama_3525	0.31	+0.5
4,160,511	+		Sama_3525	0.31	-1.2
4,160,511	+		Sama_3525	0.31	-0.3
4,160,511	+		Sama_3525	0.31	+0.1
4,160,511	+		Sama_3525	0.31	-1.3
4,160,512	-		Sama_3525	0.31	-0.2
4,160,512	-		Sama_3525	0.31	+0.9
4,160,512	-		Sama_3525	0.31	+1.0
4,160,512	-		Sama_3525	0.31	+1.5
4,160,512	-		Sama_3525	0.31	+2.9
4,160,583	-		Sama_3525	0.44	-0.6
4,160,797	+		Sama_3525	0.84	+1.3
4,160,797	+		Sama_3525	0.84	+3.6
4,160,797	+		Sama_3525	0.84	-1.9
4,160,798	-		Sama_3525	0.84	+0.4
4,160,798	-		Sama_3525	0.84	+1.2
4,160,798	-		Sama_3525	0.84	+0.1
4,160,798	-		Sama_3525	0.84	+0.3
4,160,834	+				-1.4
4,160,835	-				+0.8
4,160,852	+				+0.5
4,160,852	+				-1.2
4,160,852	+				-0.3
4,160,852	+				-0.2
4,160,852	+				+1.0
4,160,853	-				-2.4
4,160,921	-				+0.0
4,160,921	-				+0.5
4,160,921	-				-0.7
4,160,975	+	moaC	Sama_3526	0.20	-0.2
4,160,975	+	moaC	Sama_3526	0.20	+0.5
4,160,975	+	moaC	Sama_3526	0.20	+2.4
4,160,975	+	moaC	Sama_3526	0.20	+0.9
4,160,975	+	moaC	Sama_3526	0.20	+1.2
4,160,975	+	moaC	Sama_3526	0.20	+0.8
4,160,975	+	moaC	Sama_3526	0.20	+1.0
4,160,975	+	moaC	Sama_3526	0.20	-1.1
4,160,975	+	moaC	Sama_3526	0.20	-1.1
4,160,975	+	moaC	Sama_3526	0.20	-1.2
4,160,975	+	moaC	Sama_3526	0.20	-1.5
4,160,976	-	moaC	Sama_3526	0.20	+2.6
4,160,976	-	moaC	Sama_3526	0.20	+0.9
4,160,976	-	moaC	Sama_3526	0.20	+0.9
4,160,976	-	moaC	Sama_3526	0.20	+2.5
4,160,976	-	moaC	Sama_3526	0.20	+3.6
4,160,976	-	moaC	Sama_3526	0.20	-0.6
4,160,976	-	moaC	Sama_3526	0.20	+0.1
4,160,979	+	moaC	Sama_3526	0.21	+1.3
4,160,979	+	moaC	Sama_3526	0.21	+1.7
4,160,979	+	moaC	Sama_3526	0.21	+2.3
4,160,979	+	moaC	Sama_3526	0.21	-0.3
4,160,979	+	moaC	Sama_3526	0.21	+0.2
4,160,979	+	moaC	Sama_3526	0.21	-0.7
4,160,979	+	moaC	Sama_3526	0.21	+1.2
4,160,979	+	moaC	Sama_3526	0.21	-2.1
4,160,979	+	moaC	Sama_3526	0.21	-0.7
4,160,979	+	moaC	Sama_3526	0.21	-1.1
4,160,979	+	moaC	Sama_3526	0.21	+0.3
4,160,979	+	moaC	Sama_3526	0.21	+1.8
4,160,979	+	moaC	Sama_3526	0.21	-1.1
4,160,979	+	moaC	Sama_3526	0.21	+0.4
4,160,979	+	moaC	Sama_3526	0.21	-0.3
4,160,979	+	moaC	Sama_3526	0.21	+1.7
4,160,980	-	moaC	Sama_3526	0.21	+0.2
4,160,980	-	moaC	Sama_3526	0.21	+0.4
4,160,980	-	moaC	Sama_3526	0.21	+2.8
4,160,980	-	moaC	Sama_3526	0.21	+3.1
4,160,980	-	moaC	Sama_3526	0.21	-0.1
4,160,980	-	moaC	Sama_3526	0.21	+1.0
4,160,980	-	moaC	Sama_3526	0.21	+0.5
4,161,039	+	moaC	Sama_3526	0.34	+2.1
4,161,039	+	moaC	Sama_3526	0.34	-0.8
4,161,039	+	moaC	Sama_3526	0.34	+0.6
4,161,039	+	moaC	Sama_3526	0.34	+0.1
4,161,039	+	moaC	Sama_3526	0.34	+1.4
4,161,040	-	moaC	Sama_3526	0.34	+2.3
4,161,040	-	moaC	Sama_3526	0.34	+1.4
4,161,040	-	moaC	Sama_3526	0.34	+2.5
4,161,040	-	moaC	Sama_3526	0.34	-1.5
4,161,040	-	moaC	Sama_3526	0.34	-2.3
4,161,040	-	moaC	Sama_3526	0.34	-0.8
4,161,040	-	moaC	Sama_3526	0.34	+0.1
4,161,040	-	moaC	Sama_3526	0.34	-1.1
4,161,094	+	moaC	Sama_3526	0.45	+0.9
4,161,095	-	moaC	Sama_3526	0.46	-1.9
4,161,095	-	moaC	Sama_3526	0.46	+0.5
4,161,175	+	moaC	Sama_3526	0.62	+2.3
4,161,175	+	moaC	Sama_3526	0.62	-1.1
4,161,176	-	moaC	Sama_3526	0.63	+0.8
4,161,257	+	moaC	Sama_3526	0.80	+3.1
4,161,257	+	moaC	Sama_3526	0.80	+2.4
4,161,257	+	moaC	Sama_3526	0.80	+1.4
4,161,257	+	moaC	Sama_3526	0.80	+0.7
4,161,257	+	moaC	Sama_3526	0.80	+0.1
4,161,257	+	moaC	Sama_3526	0.80	+2.8
4,161,258	-	moaC	Sama_3526	0.80	-0.5
4,161,258	-	moaC	Sama_3526	0.80	+1.8
4,161,258	-	moaC	Sama_3526	0.80	+1.9
4,161,258	-	moaC	Sama_3526	0.80	-2.3
4,161,258	-	moaC	Sama_3526	0.80	+0.2
4,161,262	+	moaC	Sama_3526	0.81	-0.2
4,161,262	+	moaC	Sama_3526	0.81	+2.1
4,161,262	+	moaC	Sama_3526	0.81	+0.5
4,161,263	-	moaC	Sama_3526	0.81	+1.8
4,161,263	-	moaC	Sama_3526	0.81	-0.3
4,161,263	-	moaC	Sama_3526	0.81	-0.5
4,161,263	-	moaC	Sama_3526	0.81	-1.9
4,161,263	-	moaC	Sama_3526	0.81	+2.3
4,161,303	+	moaC	Sama_3526	0.89	+2.5
4,161,304	-	moaC	Sama_3526	0.90	+0.3
4,161,304	-	moaC	Sama_3526	0.90	-0.1
4,161,350	+				+1.0
4,161,350	+				+1.1
4,161,350	+				-0.7
4,161,350	+				+2.4
4,161,350	+				-1.8
4,161,350	+				+0.6
4,161,350	+				+0.2
4,161,350	+				+0.9
4,161,350	+				-0.5
4,161,351	-				-1.3
4,161,351	-				+0.3
4,161,351	-				+2.1
4,161,351	-				+1.5
4,161,351	-				+1.0
4,161,351	-				+1.8
4,161,351	-				-0.2
4,161,357	+				+3.2
4,161,357	+				+1.4
4,161,357	+				-1.4
4,161,357	+				+0.7
4,161,363	+				-1.5
4,161,363	+				-1.3
4,161,363	+				+2.2
4,161,363	+				-0.9
4,161,364	-				+0.3
4,161,364	-				+1.0
4,161,364	-				+2.9
4,161,364	-				-0.6
4,161,364	-				+0.1
4,161,386	+		Sama_3527	0.11	+1.5
4,161,386	+		Sama_3527	0.11	-0.5
4,161,387	-		Sama_3527	0.12	+2.9
4,161,420	-		Sama_3527	0.25	+0.5
4,161,497	+		Sama_3527	0.55	+0.1
4,161,497	+		Sama_3527	0.55	+2.1
4,161,498	-		Sama_3527	0.56	+1.4
4,161,498	-		Sama_3527	0.56	+2.4
4,161,498	-		Sama_3527	0.56	+2.1
4,161,498	-		Sama_3527	0.56	+3.0
4,161,498	-		Sama_3527	0.56	+0.8
4,161,500	+		Sama_3527	0.56	+2.8
4,161,500	+		Sama_3527	0.56	+2.7
4,161,500	+		Sama_3527	0.56	+2.2
4,161,501	-		Sama_3527	0.57	+0.5
4,161,501	-		Sama_3527	0.57	-0.1
4,161,610	+				-1.8
4,161,610	+				+2.7
4,161,610	+				-0.5
4,161,611	-				+0.9
4,161,665	+		Sama_3528	0.12	+0.2
4,161,665	+		Sama_3528	0.12	-0.5
4,161,665	+		Sama_3528	0.12	+1.7
4,161,665	+		Sama_3528	0.12	+1.4
4,161,666	-		Sama_3528	0.12	+1.4
4,161,773	+		Sama_3528	0.35	+2.1
4,161,773	+		Sama_3528	0.35	+0.3
4,161,774	-		Sama_3528	0.36	+1.4
4,161,898	+		Sama_3528	0.63	+1.6
4,161,898	+		Sama_3528	0.63	+1.4
4,161,898	+		Sama_3528	0.63	-0.1
4,161,899	-		Sama_3528	0.63	+0.1
4,161,899	-		Sama_3528	0.63	-0.6
4,161,899	-		Sama_3528	0.63	-0.2
4,161,899	-		Sama_3528	0.63	-0.8
4,161,899	-		Sama_3528	0.63	+2.4
4,162,067	+				+1.1
4,162,067	+				+1.3
4,162,067	+				-0.7
4,162,067	+				-0.5
4,162,068	-				+1.0
4,162,100	+				-0.8
4,162,100	+				-1.3
4,162,101	-				-1.1
4,162,101	-				+2.4
4,162,101	-				+0.8
4,162,101	-				-0.5
4,162,101	-				+0.2
4,162,115	+				-2.5
4,162,115	+				-1.6
4,162,115	+				-0.2
4,162,115	+				-0.3
4,162,116	-				-1.1
4,162,116	-				-0.2
4,162,116	-				-2.5
4,162,116	-				-2.7
4,162,116	-				-1.7
4,162,116	-				+0.7
4,162,116	-				+0.0
4,162,122	+				-0.8
4,162,194	+		Sama_3529	0.13	-1.5
4,162,194	+		Sama_3529	0.13	+1.4
4,162,194	+		Sama_3529	0.13	-0.1
4,162,194	+		Sama_3529	0.13	-0.1
4,162,194	+		Sama_3529	0.13	-1.1
4,162,194	+		Sama_3529	0.13	-2.3
4,162,194	+		Sama_3529	0.13	-1.8
4,162,195	-		Sama_3529	0.13	+0.1
4,162,195	-		Sama_3529	0.13	-1.9
4,162,214	+		Sama_3529	0.15	+1.2
4,162,214	+		Sama_3529	0.15	+0.3
4,162,214	+		Sama_3529	0.15	+0.4
4,162,214	+		Sama_3529	0.15	-0.5
4,162,214	+		Sama_3529	0.15	-1.1
4,162,214	+		Sama_3529	0.15	+0.9
4,162,214	+		Sama_3529	0.15	-1.9
4,162,214	+		Sama_3529	0.15	-1.0
4,162,214	+		Sama_3529	0.15	+0.1
4,162,214	+		Sama_3529	0.15	+2.1
4,162,214	+		Sama_3529	0.15	-1.2
4,162,214	+		Sama_3529	0.15	-1.8
4,162,214	+		Sama_3529	0.15	+0.0
4,162,215	-		Sama_3529	0.15	+1.1
4,162,215	-		Sama_3529	0.15	-0.0
4,162,215	-		Sama_3529	0.15	-0.9
4,162,215	-		Sama_3529	0.15	+1.1
4,162,215	-		Sama_3529	0.15	-2.1
4,162,215	-		Sama_3529	0.15	+0.6
4,162,215	-		Sama_3529	0.15	-0.7
4,162,215	-		Sama_3529	0.15	+0.1
4,162,215	-		Sama_3529	0.15	+0.7
4,162,215	-		Sama_3529	0.15	-0.6
4,162,215	-		Sama_3529	0.15	-1.3
4,162,246	-		Sama_3529	0.19	-0.4
4,162,246	-		Sama_3529	0.19	+0.6
4,162,261	+		Sama_3529	0.21	+2.2
4,162,339	+		Sama_3529	0.31	+0.8
4,162,339	+		Sama_3529	0.31	+1.0
4,162,339	+		Sama_3529	0.31	+0.1
4,162,339	+		Sama_3529	0.31	-0.5
4,162,339	+		Sama_3529	0.31	-0.7
4,162,339	+		Sama_3529	0.31	-0.3
4,162,339	+		Sama_3529	0.31	+1.1
4,162,339	+		Sama_3529	0.31	+2.9
4,162,340	-		Sama_3529	0.31	-1.4
4,162,340	-		Sama_3529	0.31	-1.6
4,162,340	-		Sama_3529	0.31	+0.5
4,162,340	-		Sama_3529	0.31	+0.2
4,162,340	-		Sama_3529	0.31	-1.8
4,162,340	-		Sama_3529	0.31	-1.9
4,162,343	+		Sama_3529	0.32	-0.7
4,162,343	+		Sama_3529	0.32	-0.5
4,162,343	+		Sama_3529	0.32	-0.3
4,162,343	+		Sama_3529	0.32	-1.2
4,162,343	+		Sama_3529	0.32	+0.1
4,162,343	+		Sama_3529	0.32	+0.1
4,162,343	+		Sama_3529	0.32	-0.4
4,162,343	+		Sama_3529	0.32	+0.1
4,162,343	+		Sama_3529	0.32	-1.2
4,162,344	-		Sama_3529	0.32	-2.6
4,162,344	-		Sama_3529	0.32	+0.1
4,162,344	-		Sama_3529	0.32	-2.6
4,162,344	-		Sama_3529	0.32	+0.5
4,162,344	-		Sama_3529	0.32	-0.6
4,162,387	-		Sama_3529	0.37	-1.2
4,162,387	-		Sama_3529	0.37	+0.8
4,162,387	-		Sama_3529	0.37	-0.8
4,162,387	-		Sama_3529	0.37	-0.2
4,162,390	+		Sama_3529	0.38	-1.0
4,162,390	+		Sama_3529	0.38	+0.7
4,162,390	+		Sama_3529	0.38	-1.7
4,162,390	+		Sama_3529	0.38	-0.5
4,162,391	-		Sama_3529	0.38	-1.1
4,162,391	-		Sama_3529	0.38	+0.3
4,162,391	-		Sama_3529	0.38	+0.3
4,162,391	-		Sama_3529	0.38	-0.1
4,162,391	-		Sama_3529	0.38	-2.4
4,162,391	-		Sama_3529	0.38	+0.1
4,162,391	-		Sama_3529	0.38	+1.6
4,162,391	-		Sama_3529	0.38	+0.9
4,162,391	-		Sama_3529	0.38	-0.2
4,162,391	-		Sama_3529	0.38	-0.2
4,162,391	-		Sama_3529	0.38	-0.1
4,162,391	-		Sama_3529	0.38	+0.2
4,162,391	-		Sama_3529	0.38	+1.2
4,162,391	-		Sama_3529	0.38	-0.1
4,162,396	+		Sama_3529	0.38	+0.0
4,162,396	+		Sama_3529	0.38	+1.0
4,162,396	+		Sama_3529	0.38	+0.5
4,162,396	+		Sama_3529	0.38	-1.4
4,162,396	+		Sama_3529	0.38	-0.1
4,162,397	-		Sama_3529	0.39	-0.5
4,162,397	-		Sama_3529	0.39	-1.3
4,162,397	-		Sama_3529	0.39	+0.1
4,162,520	+		Sama_3529	0.54	+1.7
4,162,529	-		Sama_3529	0.55	+0.3
4,162,581	+		Sama_3529	0.62	-0.4
4,162,582	-		Sama_3529	0.62	+0.3