Strain Fitness in Shewanella amazonensis SB2B around Sama_3164

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
3,750,648	-		Sama_3163	0.68	+0.1
3,750,680	+		Sama_3163	0.69	-2.6
3,750,681	-		Sama_3163	0.69	-2.0
3,750,681	-		Sama_3163	0.69	+0.5
3,750,681	-		Sama_3163	0.69	+2.3
3,750,692	-		Sama_3163	0.70	+1.7
3,750,711	-		Sama_3163	0.71	+1.0
3,750,711	-		Sama_3163	0.71	+1.6
3,750,711	-		Sama_3163	0.71	+0.2
3,750,739	+		Sama_3163	0.72	-2.6
3,750,739	+		Sama_3163	0.72	+2.3
3,750,739	+		Sama_3163	0.72	+0.2
3,750,740	-		Sama_3163	0.72	+0.8
3,750,751	+		Sama_3163	0.73	-0.1
3,750,751	+		Sama_3163	0.73	-0.5
3,750,751	+		Sama_3163	0.73	+2.7
3,750,751	+		Sama_3163	0.73	-0.4
3,750,751	+		Sama_3163	0.73	-2.0
3,750,751	+		Sama_3163	0.73	-2.2
3,750,751	+		Sama_3163	0.73	+0.4
3,750,751	+		Sama_3163	0.73	+0.9
3,750,751	+		Sama_3163	0.73	-0.3
3,750,752	-		Sama_3163	0.73	+1.7
3,750,752	-		Sama_3163	0.73	+0.8
3,750,752	-		Sama_3163	0.73	+3.7
3,750,752	-		Sama_3163	0.73	-0.6
3,750,752	-		Sama_3163	0.73	+2.3
3,750,752	-		Sama_3163	0.73	+1.7
3,750,752	-		Sama_3163	0.73	+0.4
3,750,752	-		Sama_3163	0.73	+2.7
3,750,752	-		Sama_3163	0.73	+2.5
3,750,752	-		Sama_3163	0.73	+1.6
3,750,752	-		Sama_3163	0.73	-0.9
3,750,752	-		Sama_3163	0.73	+3.1
3,750,752	-		Sama_3163	0.73	+0.2
3,750,792	+		Sama_3163	0.75	+0.0
3,750,793	-		Sama_3163	0.75	+1.7
3,750,793	-		Sama_3163	0.75	+2.3
3,750,801	-		Sama_3163	0.75	+1.5
3,750,815	+		Sama_3163	0.76	-2.5
3,750,816	-		Sama_3163	0.76	+2.0
3,750,824	+		Sama_3163	0.76	-2.0
3,750,824	+		Sama_3163	0.76	+0.8
3,750,825	-		Sama_3163	0.76	+3.1
3,750,825	-		Sama_3163	0.76	+1.5
3,750,874	+		Sama_3163	0.79	+0.0
3,750,874	+		Sama_3163	0.79	-1.9
3,750,874	+		Sama_3163	0.79	+1.5
3,750,874	+		Sama_3163	0.79	-0.7
3,750,874	+		Sama_3163	0.79	+0.3
3,750,874	+		Sama_3163	0.79	-0.0
3,750,874	+		Sama_3163	0.79	+0.6
3,750,874	+		Sama_3163	0.79	-0.6
3,750,874	+		Sama_3163	0.79	-1.2
3,750,874	+		Sama_3163	0.79	-0.3
3,750,874	+		Sama_3163	0.79	-0.7
3,750,874	+		Sama_3163	0.79	-2.9
3,750,875	-		Sama_3163	0.79	-1.4
3,750,875	-		Sama_3163	0.79	+3.7
3,750,875	-		Sama_3163	0.79	+1.3
3,750,875	-		Sama_3163	0.79	+2.7
3,750,875	-		Sama_3163	0.79	+0.0
3,750,875	-		Sama_3163	0.79	+1.4
3,750,925	+		Sama_3163	0.81	+2.2
3,750,926	-		Sama_3163	0.81	+2.9
3,750,926	-		Sama_3163	0.81	-0.1
3,750,940	+		Sama_3163	0.82	+0.7
3,750,940	+		Sama_3163	0.82	+0.0
3,750,940	+		Sama_3163	0.82	-0.5
3,750,940	+		Sama_3163	0.82	+2.3
3,750,940	+		Sama_3163	0.82	+0.4
3,750,940	+		Sama_3163	0.82	-1.3
3,750,940	+		Sama_3163	0.82	-1.6
3,750,940	+		Sama_3163	0.82	-2.1
3,750,940	+		Sama_3163	0.82	+0.7
3,750,940	+		Sama_3163	0.82	-0.9
3,750,941	-		Sama_3163	0.82	-1.4
3,750,941	-		Sama_3163	0.82	-0.3
3,750,941	-		Sama_3163	0.82	+0.6
3,750,941	-		Sama_3163	0.82	-1.2
3,750,941	-		Sama_3163	0.82	+1.4
3,750,941	-		Sama_3163	0.82	+1.2
3,750,941	-		Sama_3163	0.82	+0.7
3,750,941	-		Sama_3163	0.82	+1.9
3,750,941	-		Sama_3163	0.82	+2.0
3,750,941	-		Sama_3163	0.82	+0.7
3,750,941	-		Sama_3163	0.82	-1.0
3,750,941	-		Sama_3163	0.82	+0.7
3,750,965	-		Sama_3163	0.83	+0.2
3,751,029	-		Sama_3163	0.86	+0.2
3,751,029	-		Sama_3163	0.86	+1.4
3,751,029	-		Sama_3163	0.86	-1.0
3,751,029	-		Sama_3163	0.86	+2.8
3,751,070	-		Sama_3163	0.88	-1.0
3,751,070	-		Sama_3163	0.88	+0.4
3,751,072	+		Sama_3163	0.88	+1.6
3,751,072	+		Sama_3163	0.88	-2.0
3,751,072	+		Sama_3163	0.88	-0.2
3,751,072	+		Sama_3163	0.88	-0.4
3,751,072	+		Sama_3163	0.88	+1.8
3,751,072	+		Sama_3163	0.88	+0.0
3,751,072	+		Sama_3163	0.88	-0.6
3,751,072	+		Sama_3163	0.88	+3.8
3,751,072	+		Sama_3163	0.88	-1.8
3,751,072	+		Sama_3163	0.88	-0.1
3,751,072	+		Sama_3163	0.88	+2.2
3,751,073	-		Sama_3163	0.89	+0.1
3,751,073	-		Sama_3163	0.89	+2.4
3,751,073	-		Sama_3163	0.89	-2.5
3,751,099	+		Sama_3163	0.90	-0.3
3,751,099	+		Sama_3163	0.90	+0.8
3,751,099	+		Sama_3163	0.90	-1.1
3,751,099	+		Sama_3163	0.90	+1.3
3,751,099	+		Sama_3163	0.90	-0.3
3,751,099	+		Sama_3163	0.90	-1.0
3,751,099	+		Sama_3163	0.90	-0.6
3,751,099	+		Sama_3163	0.90	-0.7
3,751,100	-		Sama_3163	0.90	+0.0
3,751,100	-		Sama_3163	0.90	+0.6
3,751,100	-		Sama_3163	0.90	+1.3
3,751,100	-		Sama_3163	0.90	-0.4
3,751,100	-		Sama_3163	0.90	-1.0
3,751,100	-		Sama_3163	0.90	-0.9
3,751,100	-		Sama_3163	0.90	+1.7
3,751,100	-		Sama_3163	0.90	+0.7
3,751,100	-		Sama_3163	0.90	+0.4
3,751,100	-		Sama_3163	0.90	+1.4
3,751,100	-		Sama_3163	0.90	-2.1
3,751,139	+				-2.4
3,751,140	-				+1.7
3,751,140	-				+0.0
3,751,174	+				+1.3
3,751,174	+				+1.0
3,751,174	+				+1.4
3,751,174	+				+1.0
3,751,174	+				-0.7
3,751,175	-				-1.6
3,751,184	+				-1.7
3,751,184	+				+1.1
3,751,184	+				+0.5
3,751,185	-				-0.6
3,751,185	-				+1.4
3,751,255	+				-0.2
3,751,255	+				+1.0
3,751,255	+				+1.9
3,751,255	+				+0.3
3,751,255	+				-2.4
3,751,255	+				-1.0
3,751,255	+				+0.7
3,751,256	-				+0.5
3,751,256	-				+1.1
3,751,256	-				+2.0
3,751,256	-				+2.1
3,751,256	-				+0.4
3,751,256	-				+2.2
3,751,376	+				+0.0
3,751,376	+				+0.4
3,751,376	+				-0.1
3,751,377	-				+2.3
3,751,377	-				+0.7
3,751,377	-				+0.8
3,751,394	-				-0.3
3,751,394	-				+1.4
3,751,401	+				+0.0
3,751,401	+				-2.8
3,751,401	+				-1.2
3,751,402	-				+2.2
3,751,402	-				+1.7
3,751,402	-				+1.4
3,751,402	-				-1.2
3,751,413	+				+1.3
3,751,414	-				+0.8
3,751,414	-				-1.1
3,751,414	-				+2.4
3,751,414	-				-0.2
3,751,414	-				+1.0
3,751,414	-				+1.3
3,751,414	-				+2.4
3,751,424	+				+0.9
3,751,424	+				+1.8
3,751,424	+				-0.0
3,751,424	+				+0.1
3,751,424	+				-1.4
3,751,424	+				+2.0
3,751,424	+				-1.0
3,751,424	+				-0.8
3,751,424	+				-1.6
3,751,424	+				-1.4
3,751,424	+				+1.3
3,751,424	+				-0.6
3,751,424	+				-1.1
3,751,425	-				+0.7
3,751,425	-				+2.0
3,751,425	-				-0.4
3,751,425	-				+0.9
3,751,425	-				+2.4
3,751,425	-				+2.4
3,751,425	-				-0.2
3,751,425	-				+0.5
3,751,425	-				-2.0
3,751,425	-				+3.0
3,751,425	-				+1.3
3,751,425	-				+0.3
3,751,425	-				+0.2
3,751,425	-				+0.0
3,751,425	-				-2.7
3,751,434	+				+0.4
3,751,446	+				+1.4
3,751,446	+				-3.0
3,751,482	-				-0.2
3,751,484	+				-0.8
3,751,532	+				-1.1
3,751,613	-				+0.7
3,751,623	+				-0.4
3,751,628	-				+0.6
3,751,628	-				-0.3
3,751,647	-				+2.0
3,751,658	-				-0.8
3,751,658	-				+2.4
3,751,679	+		Sama_3164	0.17	+2.3
3,751,770	+		Sama_3164	0.67	-2.8
3,751,770	+		Sama_3164	0.67	+1.8
3,751,770	+		Sama_3164	0.67	-0.6
3,751,770	+		Sama_3164	0.67	+0.3
3,751,771	-		Sama_3164	0.68	+0.7
3,751,771	-		Sama_3164	0.68	+1.5
3,751,771	-		Sama_3164	0.68	-1.0
3,751,827	+				+1.0
3,751,827	+				-1.9
3,751,843	+				+2.2
3,751,844	-				+0.8
3,751,844	-				-1.8
3,751,844	-				+2.0
3,751,873	+				-1.4
3,751,873	+				-0.6
3,751,889	+				-0.6
3,751,889	+				-0.7
3,751,890	-				+1.5
3,751,890	-				+0.8
3,751,921	+				-0.5
3,751,921	+				-0.3
3,751,922	-				-3.3
3,751,946	+				+1.1
3,751,973	+				+2.6
3,751,973	+				+0.7
3,751,974	-				-0.5
3,751,974	-				-0.6
3,751,974	-				-1.7
3,752,047	+				-1.3
3,752,047	+				+0.3
3,752,047	+				-0.1
3,752,047	+				+2.2
3,752,047	+				+0.5
3,752,048	-				-1.0
3,752,048	-				-1.0
3,752,048	-				-2.3
3,752,048	+				-0.7
3,752,048	-				-1.8
3,752,100	+		Sama_3165	0.11	-1.9
3,752,101	-		Sama_3165	0.11	-0.6
3,752,101	-		Sama_3165	0.11	-0.3
3,752,110	-		Sama_3165	0.12	-0.1
3,752,124	-		Sama_3165	0.13	+1.9
3,752,124	-		Sama_3165	0.13	+2.0
3,752,223	+		Sama_3165	0.20	-0.3
3,752,224	-		Sama_3165	0.20	-2.5
3,752,224	-		Sama_3165	0.20	+1.7
3,752,224	-		Sama_3165	0.20	+1.0
3,752,227	+		Sama_3165	0.20	-1.3
3,752,227	+		Sama_3165	0.20	+0.5
3,752,227	+		Sama_3165	0.20	-1.1
3,752,227	+		Sama_3165	0.20	-1.9
3,752,227	+		Sama_3165	0.20	+0.4
3,752,228	-		Sama_3165	0.20	-0.8
3,752,255	+		Sama_3165	0.22	+0.3
3,752,255	+		Sama_3165	0.22	+0.3
3,752,362	+		Sama_3165	0.30	+1.9
3,752,362	+		Sama_3165	0.30	-1.0
3,752,362	+		Sama_3165	0.30	+1.4
3,752,363	-		Sama_3165	0.30	+0.5
3,752,393	+		Sama_3165	0.33	-0.6
3,752,393	+		Sama_3165	0.33	-0.6
3,752,393	+		Sama_3165	0.33	+1.6
3,752,393	+		Sama_3165	0.33	-1.2
3,752,393	+		Sama_3165	0.33	+0.6
3,752,394	-		Sama_3165	0.33	-0.8
3,752,394	-		Sama_3165	0.33	-1.3
3,752,394	-		Sama_3165	0.33	+0.1
3,752,395	+		Sama_3165	0.33	+1.7
3,752,395	+		Sama_3165	0.33	+1.1
3,752,395	+		Sama_3165	0.33	+1.0
3,752,395	+		Sama_3165	0.33	-1.7
3,752,395	+		Sama_3165	0.33	-1.0
3,752,395	+		Sama_3165	0.33	-0.4
3,752,396	-		Sama_3165	0.33	-2.6
3,752,495	+		Sama_3165	0.40	-1.9
3,752,496	-		Sama_3165	0.40	-2.4
3,752,526	+		Sama_3165	0.42	+0.4
3,752,526	+		Sama_3165	0.42	+2.8
3,752,572	+		Sama_3165	0.46	+1.4
3,752,572	+		Sama_3165	0.46	-2.2
3,752,573	-		Sama_3165	0.46	-0.3
3,752,573	-		Sama_3165	0.46	+1.4
3,752,618	+		Sama_3165	0.49	+1.2
3,752,618	+		Sama_3165	0.49	-2.1
3,752,618	+		Sama_3165	0.49	-1.8
3,752,618	+		Sama_3165	0.49	+0.6
3,752,618	+		Sama_3165	0.49	-0.8
3,752,619	-		Sama_3165	0.49	-1.6
3,752,619	-		Sama_3165	0.49	+1.6
3,752,619	-		Sama_3165	0.49	+1.2
3,752,619	-		Sama_3165	0.49	-1.3
3,752,619	-		Sama_3165	0.49	-0.7
3,752,619	-		Sama_3165	0.49	+0.3
3,752,619	-		Sama_3165	0.49	-1.3
3,752,619	-		Sama_3165	0.49	-0.5
3,752,640	+		Sama_3165	0.51	+1.1
3,752,641	-		Sama_3165	0.51	+1.0
3,752,815	+		Sama_3165	0.64	-1.0
3,752,816	-		Sama_3165	0.64	+0.5