Strain Fitness in Shewanella amazonensis SB2B around Sama_3103

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
3,676,242	-		Sama_3102	0.15	-0.2
3,676,327	-		Sama_3102	0.26	-0.5
3,676,398	+		Sama_3102	0.35	+1.1
3,676,398	+		Sama_3102	0.35	-1.1
3,676,398	+		Sama_3102	0.35	+0.3
3,676,398	+		Sama_3102	0.35	+1.4
3,676,399	-		Sama_3102	0.35	+0.3
3,676,399	-		Sama_3102	0.35	+0.4
3,676,399	-		Sama_3102	0.35	-1.3
3,676,399	-		Sama_3102	0.35	-2.5
3,676,399	-		Sama_3102	0.35	-0.3
3,676,399	-		Sama_3102	0.35	+0.4
3,676,399	-		Sama_3102	0.35	-0.6
3,676,399	-		Sama_3102	0.35	+1.0
3,676,399	-		Sama_3102	0.35	-0.9
3,676,444	+		Sama_3102	0.41	-1.7
3,676,445	-		Sama_3102	0.41	+0.8
3,676,445	-		Sama_3102	0.41	+1.8
3,676,445	-		Sama_3102	0.41	-0.3
3,676,514	-		Sama_3102	0.50	-0.0
3,676,514	-		Sama_3102	0.50	-1.2
3,676,529	-		Sama_3102	0.52	+0.1
3,676,537	-		Sama_3102	0.53	-1.2
3,676,594	+		Sama_3102	0.60	+0.8
3,676,595	-		Sama_3102	0.61	+0.3
3,676,609	+		Sama_3102	0.62	-1.3
3,676,610	-		Sama_3102	0.62	-1.1
3,676,615	+		Sama_3102	0.63	+0.2
3,676,720	+		Sama_3102	0.77	-0.6
3,676,720	+		Sama_3102	0.77	+0.6
3,676,720	+		Sama_3102	0.77	+0.9
3,676,720	+		Sama_3102	0.77	+0.3
3,676,720	+		Sama_3102	0.77	-0.4
3,676,720	+		Sama_3102	0.77	-0.6
3,676,720	+		Sama_3102	0.77	-2.2
3,676,721	-		Sama_3102	0.77	-2.3
3,676,721	-		Sama_3102	0.77	+0.5
3,676,721	-		Sama_3102	0.77	-0.2
3,676,741	+		Sama_3102	0.80	+0.0
3,676,741	+		Sama_3102	0.80	+1.5
3,676,741	+		Sama_3102	0.80	-0.0
3,676,742	-		Sama_3102	0.80	-0.6
3,676,742	-		Sama_3102	0.80	-0.7
3,676,742	-		Sama_3102	0.80	-0.3
3,676,777	+		Sama_3102	0.84	-0.1
3,676,778	-		Sama_3102	0.84	+0.1
3,676,854	+				-0.3
3,676,854	+				-3.1
3,676,854	+				+0.7
3,676,854	+				-1.1
3,676,854	+				+0.5
3,676,854	+				+1.5
3,676,854	+				+0.5
3,676,854	+				+1.3
3,676,854	+				-1.0
3,676,855	-				-0.3
3,676,855	-				-1.0
3,676,855	-				+3.1
3,676,855	-				-0.5
3,676,855	-				-0.5
3,676,855	-				+1.1
3,676,855	-				-1.6
3,676,855	-				-1.0
3,676,855	-				-0.5
3,676,855	-				+1.7
3,676,855	-				+2.7
3,676,867	+				+0.8
3,676,893	+				-0.3
3,676,893	+				-1.5
3,676,893	+				+0.1
3,676,893	+				-2.1
3,676,894	-				-0.0
3,676,894	-				-1.8
3,676,894	-				+0.9
3,676,894	-				+0.2
3,676,894	-				-0.3
3,676,894	-				-2.2
3,676,897	+				+1.2
3,676,897	+				+0.9
3,676,897	+				-1.2
3,676,897	+				-0.4
3,676,897	+				-0.0
3,676,897	+				-0.5
3,676,897	+				-0.5
3,676,898	-				-0.4
3,676,898	-				+0.2
3,676,898	-				-0.6
3,676,927	+				+2.0
3,676,927	+				-0.2
3,676,928	-				+1.1
3,676,957	+				-0.8
3,676,984	+				+2.0
3,676,985	-				-2.4
3,676,985	-				-1.3
3,677,019	+				-1.7
3,677,019	+				+0.4
3,677,040	+				-0.2
3,677,050	+				+0.3
3,677,050	+				+1.3
3,677,050	+				+0.8
3,677,050	+				-0.0
3,677,050	+				+1.2
3,677,050	+				+0.8
3,677,050	+				+1.9
3,677,051	-				-0.1
3,677,051	-				-1.7
3,677,109	+				+1.3
3,677,114	+				-0.8
3,677,115	-				-0.8
3,677,115	-				+1.2
3,677,147	+				-3.4
3,677,147	+				-0.2
3,677,147	+				-0.3
3,677,147	+				+0.6
3,677,147	+				-1.5
3,677,147	+				-2.0
3,677,147	+				-0.8
3,677,147	+				-0.7
3,677,147	+				+1.8
3,677,147	+				+2.6
3,677,148	-				+1.1
3,677,148	-				-2.9
3,677,148	-				+0.2
3,677,148	-				-0.0
3,677,148	-				-1.0
3,677,148	-				-0.0
3,677,148	-				+0.8
3,677,148	-				+1.3
3,677,148	-				-1.9
3,677,148	-				-0.6
3,677,148	-				-0.5
3,677,148	-				-1.1
3,677,148	-				-0.3
3,677,148	-				+1.2
3,677,150	+				-0.4
3,677,150	+				-0.7
3,677,150	+				-0.0
3,677,150	+				-1.3
3,677,150	+				-0.1
3,677,150	+				+1.6
3,677,151	-				-0.2
3,677,151	-				+0.3
3,677,151	-				-0.6
3,677,151	-				-0.2
3,677,151	-				+1.1
3,677,151	-				+0.4
3,677,151	-				+0.3
3,677,151	-				+1.2
3,677,151	-				+0.8
3,677,151	-				+1.5
3,677,151	-				+0.3
3,677,151	-				-1.0
3,677,154	+				-3.1
3,677,154	+				-1.0
3,677,208	-				-0.0
3,677,239	-				+0.9
3,677,272	+				-0.6
3,677,273	-				+1.7
3,677,308	+		Sama_3103	0.15	+0.7
3,677,308	+		Sama_3103	0.15	-1.6
3,677,308	+		Sama_3103	0.15	+0.1
3,677,308	+		Sama_3103	0.15	-0.8
3,677,308	+		Sama_3103	0.15	+0.3
3,677,308	+		Sama_3103	0.15	-2.2
3,677,350	+		Sama_3103	0.23	-2.2
3,677,350	+		Sama_3103	0.23	+0.4
3,677,350	+		Sama_3103	0.23	-0.8
3,677,351	-		Sama_3103	0.23	+2.2
3,677,351	-		Sama_3103	0.23	-1.4
3,677,351	-		Sama_3103	0.23	-0.6
3,677,364	+		Sama_3103	0.25	+0.6
3,677,364	+		Sama_3103	0.25	+0.4
3,677,364	+		Sama_3103	0.25	-0.5
3,677,364	+		Sama_3103	0.25	+0.2
3,677,364	+		Sama_3103	0.25	+0.4
3,677,364	+		Sama_3103	0.25	-2.9
3,677,364	+		Sama_3103	0.25	-0.0
3,677,364	+		Sama_3103	0.25	+0.9
3,677,365	-		Sama_3103	0.25	-1.3
3,677,365	-		Sama_3103	0.25	+0.8
3,677,365	-		Sama_3103	0.25	-1.9
3,677,419	+		Sama_3103	0.35	-0.9
3,677,491	+		Sama_3103	0.48	+0.2
3,677,491	+		Sama_3103	0.48	-0.0
3,677,492	-		Sama_3103	0.48	-0.4
3,677,511	+		Sama_3103	0.52	+0.8
3,677,511	+		Sama_3103	0.52	-1.0
3,677,511	+		Sama_3103	0.52	+0.0
3,677,511	+		Sama_3103	0.52	+0.9
3,677,511	+		Sama_3103	0.52	+1.8
3,677,511	+		Sama_3103	0.52	-3.0
3,677,511	+		Sama_3103	0.52	-0.3
3,677,512	-		Sama_3103	0.52	+0.3
3,677,512	-		Sama_3103	0.52	-0.3
3,677,512	-		Sama_3103	0.52	+0.5
3,677,512	-		Sama_3103	0.52	-0.3
3,677,512	-		Sama_3103	0.52	-0.6
3,677,512	-		Sama_3103	0.52	-0.4
3,677,517	+		Sama_3103	0.53	-2.0
3,677,518	-		Sama_3103	0.53	+0.4
3,677,526	+		Sama_3103	0.54	+0.5
3,677,526	+		Sama_3103	0.54	-1.0
3,677,527	-		Sama_3103	0.54	+0.2
3,677,543	-		Sama_3103	0.57	-0.3
3,677,547	+		Sama_3103	0.58	+0.2
3,677,548	-		Sama_3103	0.58	-2.2
3,677,569	+		Sama_3103	0.62	-0.8
3,677,569	+		Sama_3103	0.62	-1.0
3,677,569	+		Sama_3103	0.62	-0.2
3,677,570	-		Sama_3103	0.62	-0.8
3,677,570	-		Sama_3103	0.62	-1.4
3,677,575	+		Sama_3103	0.63	+1.5
3,677,575	+		Sama_3103	0.63	-0.8
3,677,575	+		Sama_3103	0.63	-0.5
3,677,619	+		Sama_3103	0.71	-0.2
3,677,619	+		Sama_3103	0.71	+0.7
3,677,619	+		Sama_3103	0.71	-2.3
3,677,619	+		Sama_3103	0.71	-2.5
3,677,619	+		Sama_3103	0.71	+0.4
3,677,619	+		Sama_3103	0.71	+0.7
3,677,619	+		Sama_3103	0.71	+0.0
3,677,640	+		Sama_3103	0.75	+0.1
3,677,640	+		Sama_3103	0.75	-2.4
3,677,641	-		Sama_3103	0.75	-0.1
3,677,656	+		Sama_3103	0.77	-1.3
3,677,656	+		Sama_3103	0.77	+0.1
3,677,656	+		Sama_3103	0.77	-2.0
3,677,663	+		Sama_3103	0.79	+0.1
3,677,663	+		Sama_3103	0.79	-1.7
3,677,663	+		Sama_3103	0.79	-0.5
3,677,663	+		Sama_3103	0.79	-0.9
3,677,663	+		Sama_3103	0.79	-1.0
3,677,664	-		Sama_3103	0.79	+0.1
3,677,664	-		Sama_3103	0.79	-1.7
3,677,664	-		Sama_3103	0.79	-2.3
3,677,664	-		Sama_3103	0.79	+2.8
3,677,664	-		Sama_3103	0.79	-1.0
3,677,664	-		Sama_3103	0.79	-1.9
3,677,664	-		Sama_3103	0.79	-1.3
3,677,664	-		Sama_3103	0.79	-0.5
3,677,702	+		Sama_3103	0.86	+0.6
3,677,703	-		Sama_3103	0.86	-1.5
3,677,912	+		Sama_3104	0.47	-1.9
3,677,913	-		Sama_3104	0.47	+0.2
3,677,913	-		Sama_3104	0.47	-2.5
3,677,913	-		Sama_3104	0.47	+1.3
3,677,913	-		Sama_3104	0.47	-0.7
3,678,037	+		Sama_3104	0.90	+2.2
3,678,037	+		Sama_3104	0.90	-1.2
3,678,038	-				+1.6
3,678,038	-				-1.3
3,678,038	-				-1.1
3,678,038	-				-0.9
3,678,044	+				+0.9
3,678,045	-				+0.9
3,678,045	-				+2.6
3,678,094	-				-1.0
3,678,123	+				-0.2
3,678,123	+				-2.5
3,678,124	-				+0.8
3,678,124	-				+0.7
3,678,147	+				+0.4
3,678,147	+				-1.0
3,678,147	+				-1.2
3,678,147	+				+1.0
3,678,148	-				-0.8
3,678,149	+				-0.9
3,678,149	+				+0.7
3,678,150	-				+0.3
3,678,150	-				-0.5
3,678,150	-				+0.7
3,678,150	-				+0.6
3,678,150	-				+0.2
3,678,150	-				-1.5
3,678,198	+		Sama_3105	0.11	+2.7
3,678,198	+		Sama_3105	0.11	+2.7
3,678,198	+		Sama_3105	0.11	+0.3
3,678,198	+		Sama_3105	0.11	+2.3
3,678,199	-		Sama_3105	0.11	+0.6
3,678,199	-		Sama_3105	0.11	-0.1
3,678,199	-		Sama_3105	0.11	+0.9
3,678,199	-		Sama_3105	0.11	-1.6
3,678,201	+		Sama_3105	0.11	-2.0
3,678,201	+		Sama_3105	0.11	+0.6
3,678,202	-		Sama_3105	0.11	-0.4
3,678,202	-		Sama_3105	0.11	+0.9
3,678,202	-		Sama_3105	0.11	+0.5
3,678,244	+		Sama_3105	0.18	-2.0
3,678,244	+		Sama_3105	0.18	-0.5
3,678,244	+		Sama_3105	0.18	-0.6
3,678,245	-		Sama_3105	0.18	+0.3
3,678,291	+		Sama_3105	0.25	-0.2
3,678,291	+		Sama_3105	0.25	+0.7
3,678,315	+		Sama_3105	0.29	-2.0
3,678,316	-		Sama_3105	0.29	+1.3
3,678,316	-		Sama_3105	0.29	-0.5
3,678,316	-		Sama_3105	0.29	-0.8
3,678,334	+		Sama_3105	0.32	-0.1
3,678,334	+		Sama_3105	0.32	+1.0
3,678,334	+		Sama_3105	0.32	+0.4
3,678,334	+		Sama_3105	0.32	+2.2
3,678,334	+		Sama_3105	0.32	+0.4
3,678,334	+		Sama_3105	0.32	+0.1
3,678,334	+		Sama_3105	0.32	-0.0
3,678,334	+		Sama_3105	0.32	-1.5
3,678,334	+		Sama_3105	0.32	+1.3
3,678,334	+		Sama_3105	0.32	-0.6
3,678,334	+		Sama_3105	0.32	+0.2
3,678,334	+		Sama_3105	0.32	-0.1
3,678,334	+		Sama_3105	0.32	-2.2
3,678,334	+		Sama_3105	0.32	+1.4
3,678,334	+		Sama_3105	0.32	-1.6
3,678,334	+		Sama_3105	0.32	+0.2
3,678,334	+		Sama_3105	0.32	-0.2
3,678,335	-		Sama_3105	0.32	+1.3
3,678,335	-		Sama_3105	0.32	-1.7
3,678,335	-		Sama_3105	0.32	+1.1
3,678,335	-		Sama_3105	0.32	+1.8
3,678,335	-		Sama_3105	0.32	+0.4
3,678,335	-		Sama_3105	0.32	+0.2
3,678,335	-		Sama_3105	0.32	-2.5
3,678,335	-		Sama_3105	0.32	-0.9
3,678,335	-		Sama_3105	0.32	-0.6
3,678,368	+		Sama_3105	0.37	-1.2
3,678,368	+		Sama_3105	0.37	+0.2
3,678,369	-		Sama_3105	0.37	-0.0
3,678,369	-		Sama_3105	0.37	+1.3
3,678,415	-		Sama_3105	0.44	+1.8
3,678,436	+		Sama_3105	0.47	-1.7
3,678,436	+		Sama_3105	0.47	+0.9
3,678,437	-		Sama_3105	0.47	-1.2
3,678,455	+		Sama_3105	0.50	-0.8
3,678,455	+		Sama_3105	0.50	-0.1
3,678,455	+		Sama_3105	0.50	-2.7
3,678,455	+		Sama_3105	0.50	-1.5
3,678,455	+		Sama_3105	0.50	-2.4
3,678,456	-		Sama_3105	0.50	-1.0
3,678,456	-		Sama_3105	0.50	-0.9
3,678,461	+		Sama_3105	0.51	-0.0
3,678,461	+		Sama_3105	0.51	-0.8
3,678,461	+		Sama_3105	0.51	-1.4
3,678,461	+		Sama_3105	0.51	-1.2
3,678,462	-		Sama_3105	0.51	-1.9
3,678,462	-		Sama_3105	0.51	+0.0
3,678,462	-		Sama_3105	0.51	+0.4
3,678,462	-		Sama_3105	0.51	-1.6
3,678,462	-		Sama_3105	0.51	-1.3
3,678,494	+		Sama_3105	0.56	-0.3
3,678,494	+		Sama_3105	0.56	+0.4
3,678,494	+		Sama_3105	0.56	+0.9
3,678,494	+		Sama_3105	0.56	-0.4
3,678,495	-		Sama_3105	0.56	-1.7
3,678,495	-		Sama_3105	0.56	-1.3
3,678,495	-		Sama_3105	0.56	-0.3
3,678,495	-		Sama_3105	0.56	+1.5
3,678,495	-		Sama_3105	0.56	-1.0
3,678,495	-		Sama_3105	0.56	+1.4
3,678,495	-		Sama_3105	0.56	+0.7
3,678,495	-		Sama_3105	0.56	+1.5
3,678,495	-		Sama_3105	0.56	-0.2
3,678,495	-		Sama_3105	0.56	+1.9
3,678,497	+		Sama_3105	0.57	+0.2
3,678,497	+		Sama_3105	0.57	+1.6
3,678,497	+		Sama_3105	0.57	-2.1
3,678,497	+		Sama_3105	0.57	+1.7
3,678,520	+		Sama_3105	0.60	-1.6
3,678,520	+		Sama_3105	0.60	+0.5
3,678,556	+		Sama_3105	0.66	+2.5
3,678,556	+		Sama_3105	0.66	+0.1
3,678,556	+		Sama_3105	0.66	-1.2
3,678,557	-		Sama_3105	0.66	-1.8
3,678,557	-		Sama_3105	0.66	-1.0
3,678,557	-		Sama_3105	0.66	+0.9
3,678,557	-		Sama_3105	0.66	-0.1
3,678,557	-		Sama_3105	0.66	-0.8
3,678,557	-		Sama_3105	0.66	-2.6
3,678,557	-		Sama_3105	0.66	-2.7
3,678,712	+		Sama_3105	0.90	-0.0
3,678,712	+		Sama_3105	0.90	-0.7
3,678,712	+		Sama_3105	0.90	-0.2
3,678,712	+		Sama_3105	0.90	-1.0
3,678,712	+		Sama_3105	0.90	-0.7
3,678,712	+		Sama_3105	0.90	-2.7
3,678,712	+		Sama_3105	0.90	+0.5
3,678,712	+		Sama_3105	0.90	-2.1
3,678,712	+		Sama_3105	0.90	+2.2
3,678,713	-		Sama_3105	0.90	-1.1
3,678,713	-		Sama_3105	0.90	-0.6
3,678,713	-		Sama_3105	0.90	+1.6
3,678,713	-		Sama_3105	0.90	-1.3
3,678,713	-		Sama_3105	0.90	+1.0
3,678,713	-		Sama_3105	0.90	-1.8
3,678,713	-		Sama_3105	0.90	-0.3
3,678,713	-		Sama_3105	0.90	-3.6
3,678,713	-		Sama_3105	0.90	-1.6
3,678,713	-		Sama_3105	0.90	-0.0
3,678,713	-		Sama_3105	0.90	+2.0
3,678,713	-		Sama_3105	0.90	+0.4
3,678,713	-		Sama_3105	0.90	-2.5
3,678,716	+				-0.1
3,678,716	+				+1.0
3,678,716	+				-0.4
3,678,716	+				+0.8
3,678,716	+				+1.3
3,678,716	+				-1.8
3,678,716	+				-0.3
3,678,716	+				-1.8
3,678,716	+				-1.7
3,678,716	+				-2.7
3,678,716	+				-0.6
3,678,716	+				-0.9
3,678,716	+				-1.6
3,678,717	-				+0.7
3,678,717	-				+0.6
3,678,717	-				+2.7
3,678,717	-				+1.3
3,678,717	-				-0.7
3,678,717	-				+2.2
3,678,717	-				-1.2
3,678,717	-				-0.8
3,678,717	-				-2.4
3,678,722	+				-1.2
3,678,722	+				+2.6
3,678,722	+				-1.5
3,678,722	+				-2.0
3,678,722	+				-1.9
3,678,723	-				-0.9
3,678,723	-				+0.6
3,678,723	-				+2.0
3,678,723	-				-1.3
3,678,731	+				+0.7