Strain Fitness in Shewanella amazonensis SB2B around Sama_3087

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
3,663,393	+				+0.9
3,663,393	+				+0.1
3,663,393	+				-0.1
3,663,394	-				+0.9
3,663,394	-				-1.2
3,663,397	+				-1.0
3,663,397	+				+1.8
3,663,397	+				-0.2
3,663,397	+				-0.0
3,663,398	-				-1.0
3,663,398	-				-1.6
3,663,398	-				-1.6
3,663,398	-				-1.8
3,663,401	+				-0.0
3,663,401	+				-1.1
3,663,441	-				-1.5
3,663,441	-				-1.8
3,663,460	+				-1.2
3,663,819	-		Sama_3088	0.21	-1.2
3,663,840	-		Sama_3088	0.22	-1.4
3,663,840	-		Sama_3088	0.22	-1.4
3,663,884	+		Sama_3088	0.25	-3.2
3,663,884	+		Sama_3088	0.25	-0.0
3,663,884	+		Sama_3088	0.25	-1.4
3,663,884	+		Sama_3088	0.25	-1.0
3,663,884	+		Sama_3088	0.25	-1.2
3,663,884	+		Sama_3088	0.25	-1.0
3,663,885	-		Sama_3088	0.26	-1.5
3,663,885	-		Sama_3088	0.26	-1.5
3,663,885	-		Sama_3088	0.26	-1.6
3,663,885	-		Sama_3088	0.26	-1.4
3,663,918	+		Sama_3088	0.28	-2.6
3,663,918	+		Sama_3088	0.28	-2.0
3,663,991	+		Sama_3088	0.33	-1.2
3,663,991	+		Sama_3088	0.33	-1.1
3,663,991	+		Sama_3088	0.33	-2.3
3,663,991	+		Sama_3088	0.33	-1.0
3,663,991	+		Sama_3088	0.33	-0.1
3,663,991	+		Sama_3088	0.33	-1.6
3,663,991	+		Sama_3088	0.33	-1.9
3,663,991	+		Sama_3088	0.33	-0.3
3,663,992	-		Sama_3088	0.33	-1.8
3,663,992	-		Sama_3088	0.33	-2.0
3,663,992	-		Sama_3088	0.33	-1.2
3,663,992	-		Sama_3088	0.33	-2.6
3,663,992	-		Sama_3088	0.33	-1.0
3,663,992	-		Sama_3088	0.33	+1.0
3,663,992	-		Sama_3088	0.33	-1.8
3,663,992	-		Sama_3088	0.33	-2.3
3,663,992	-		Sama_3088	0.33	-1.2
3,663,992	-		Sama_3088	0.33	-2.2
3,664,014	+		Sama_3088	0.34	-1.9
3,664,014	+		Sama_3088	0.34	-1.8
3,664,014	+		Sama_3088	0.34	-0.4
3,664,014	+		Sama_3088	0.34	-0.6
3,664,015	-		Sama_3088	0.34	-1.7
3,664,185	-		Sama_3088	0.46	-2.4
3,664,313	+		Sama_3088	0.54	-2.7
3,664,314	-		Sama_3088	0.54	-1.4
3,664,314	-		Sama_3088	0.54	-2.0
3,664,314	-		Sama_3088	0.54	-1.5
3,664,368	+		Sama_3088	0.58	-1.4
3,664,368	+		Sama_3088	0.58	-1.4
3,664,368	+		Sama_3088	0.58	-1.5
3,664,368	+		Sama_3088	0.58	-1.4
3,664,369	-		Sama_3088	0.58	-2.6
3,664,369	-		Sama_3088	0.58	-1.8
3,664,369	-		Sama_3088	0.58	-1.4
3,664,369	-		Sama_3088	0.58	-0.0
3,664,369	-		Sama_3088	0.58	-1.7
3,664,369	-		Sama_3088	0.58	-1.6
3,664,369	-		Sama_3088	0.58	-2.3
3,664,373	+		Sama_3088	0.58	+1.2
3,664,374	-		Sama_3088	0.59	-1.2