Strain Fitness in Shewanella amazonensis SB2B around Sama_2568
Experiment: Motility assay, center cut sample 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Motility assay, center cut sample 1 |
---|---|---|---|---|---|
remove | |||||
3,074,356 | - | +0.7 | |||
3,074,383 | + | +1.2 | |||
3,074,383 | + | +0.7 | |||
3,074,383 | + | +1.9 | |||
3,074,383 | + | +2.3 | |||
3,074,383 | + | +1.6 | |||
3,074,383 | + | +1.8 | |||
3,074,384 | - | -1.7 | |||
3,074,384 | - | +0.7 | |||
3,074,384 | - | +1.7 | |||
3,074,389 | + | -1.2 | |||
3,074,486 | - | +0.8 | |||
3,074,505 | + | -0.0 | |||
3,074,506 | - | +0.5 | |||
3,074,510 | + | -1.0 | |||
3,074,510 | + | +1.5 | |||
3,074,518 | + | -0.4 | |||
3,074,518 | + | +0.4 | |||
3,074,518 | + | +3.7 | |||
3,074,522 | + | +0.3 | |||
3,074,533 | + | +0.9 | |||
3,074,533 | + | +0.1 |
Or see this region's nucleotide sequence