Strain Fitness in Shewanella amazonensis SB2B around Sama_2253

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
2,715,369	-				+5.3
2,715,445	-				+1.2
2,715,450	-				+2.4
2,715,662	-		Sama_2252	0.43	+0.0
2,715,684	+		Sama_2252	0.46	+0.2
2,715,907	-		Sama_2252	0.82	+1.5
2,716,003	-				+1.6
2,716,006	-				+0.2
2,716,011	-				+3.1
2,716,014	-				+1.6
2,716,121	-				+5.1
2,716,227	-		Sama_2253	0.18	+4.6
2,716,227	-		Sama_2253	0.18	-0.6
2,716,272	-		Sama_2253	0.22	+5.6
2,716,272	-		Sama_2253	0.22	+2.0
2,716,347	-		Sama_2253	0.28	+5.3
2,716,456	-		Sama_2253	0.38	+3.8
2,716,722	-		Sama_2253	0.61	+3.1
2,716,722	-		Sama_2253	0.61	+4.3
2,716,988	-		Sama_2253	0.83	+0.2
2,717,070	-				+5.6
2,717,151	+				+8.3
2,717,152	-				+5.8