Strain Fitness in Shewanella amazonensis SB2B around Sama_1932

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
2,358,151	+	minC	Sama_1930	0.78	-0.5
2,358,181	+	minC	Sama_1930	0.82	+0.0
2,358,182	-	minC	Sama_1930	0.82	-1.2
2,358,277	-				-1.9
2,358,282	+				-0.9
2,358,282	+				-0.3
2,358,282	+				-1.5
2,358,313	+				-2.0
2,358,342	+				-0.0
2,358,342	+				-0.8
2,358,372	-				-0.8
2,358,376	-				-1.0
2,358,440	+		Sama_1931	0.13	+0.9
2,358,440	+		Sama_1931	0.13	-1.5
2,358,474	+		Sama_1931	0.18	-0.7
2,358,474	+		Sama_1931	0.18	+0.5
2,358,501	-		Sama_1931	0.21	-1.6
2,358,673	+		Sama_1931	0.42	-1.0
2,358,727	+		Sama_1931	0.49	-2.4
2,358,857	-		Sama_1931	0.65	-0.8
2,358,875	-		Sama_1931	0.67	-3.1
2,358,977	+		Sama_1931	0.80	-1.0
2,358,981	+		Sama_1931	0.80	-1.0
2,358,981	+		Sama_1931	0.80	-1.6
2,358,982	-		Sama_1931	0.80	-0.9
2,359,050	+		Sama_1931	0.89	-1.1
2,359,555	-				+1.0
2,359,555	-				-0.6
2,359,555	-				+1.0
2,359,586	-				-1.5
2,359,599	+				+0.2
2,359,599	+				-2.6
2,359,600	-				+1.6
2,359,600	-				-0.9
2,359,600	-				+0.8
2,359,603	+				-0.8
2,359,604	-				-0.3
2,359,604	-				+0.7
2,359,689	-				+1.0
2,359,724	-				+2.2
2,359,823	+		Sama_1933	0.19	-0.0
2,359,824	-		Sama_1933	0.19	-1.5
2,359,826	-		Sama_1933	0.19	-1.0
2,360,124	-		Sama_1933	0.46	-0.8
2,360,128	+		Sama_1933	0.46	-2.0
2,360,191	-		Sama_1933	0.52	-2.4
2,360,255	-		Sama_1933	0.57	-1.3
2,360,375	-		Sama_1933	0.68	-2.2