Strain Fitness in Shewanella amazonensis SB2B around Sama_1918

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
2,343,821	-		Sama_1917	0.32	+0.7
2,343,821	-		Sama_1917	0.32	-2.1
2,343,832	+		Sama_1917	0.33	-2.7
2,343,832	+		Sama_1917	0.33	-1.1
2,343,832	+		Sama_1917	0.33	-1.1
2,343,832	+		Sama_1917	0.33	-0.1
2,343,906	+		Sama_1917	0.39	-1.5
2,344,123	-		Sama_1917	0.58	-0.5
2,344,261	-		Sama_1917	0.70	-1.1
2,344,261	-		Sama_1917	0.70	-1.5
2,344,325	-		Sama_1917	0.75	-2.5
2,344,327	-		Sama_1917	0.76	-1.1
2,344,327	-		Sama_1917	0.76	-0.8
2,344,327	-		Sama_1917	0.76	-1.1
2,344,349	-		Sama_1917	0.78	-1.5
2,344,349	-		Sama_1917	0.78	-1.2
2,344,407	-		Sama_1917	0.83	-0.5
2,344,437	+		Sama_1917	0.85	-0.5
2,344,464	-		Sama_1917	0.88	+0.3
2,344,579	-				-3.5
2,344,579	-				-0.2
2,344,633	+				-1.9
2,344,646	+				+3.4
2,344,646	+				-1.1
2,344,647	-				-1.5
2,344,647	-				-1.5
2,344,647	-				+0.5
2,344,647	-				-0.7
2,344,647	-				+1.8
2,344,647	-				-0.1
2,344,647	-				+1.4
2,344,652	-				-0.8
2,344,652	-				+0.3
2,344,655	+				-0.8
2,344,656	-				+1.5
2,344,656	-				-1.8
2,344,699	+				-0.5
2,344,700	-				-0.3
2,344,720	+				+1.1
2,344,720	+				-1.7
2,344,721	-				+1.5
2,344,756	-				+2.3
2,344,777	-				+0.5
2,344,809	-				+0.4
2,344,936	+				-1.5
2,344,936	+				-2.4
2,344,936	+				+1.5
2,344,982	-		Sama_1918	0.14	+0.6
2,344,982	-		Sama_1918	0.14	-2.8
2,345,022	+		Sama_1918	0.17	+1.0
2,345,022	+		Sama_1918	0.17	+1.7
2,345,022	+		Sama_1918	0.17	-0.1
2,345,022	+		Sama_1918	0.17	+0.3
2,345,023	-		Sama_1918	0.17	-1.7
2,345,023	-		Sama_1918	0.17	-1.8
2,345,055	-		Sama_1918	0.20	+0.5
2,345,085	+		Sama_1918	0.22	-2.6
2,345,085	+		Sama_1918	0.22	+2.1
2,345,085	+		Sama_1918	0.22	-1.1
2,345,107	+		Sama_1918	0.24	-0.7
2,345,129	+		Sama_1918	0.26	-0.5
2,345,175	-		Sama_1918	0.29	-1.8
2,345,175	-		Sama_1918	0.29	-0.7
2,345,271	-		Sama_1918	0.37	+0.3
2,345,333	-		Sama_1918	0.42	+0.3
2,345,370	+		Sama_1918	0.45	-1.3
2,345,395	+		Sama_1918	0.47	+0.4
2,345,395	+		Sama_1918	0.47	-0.8
2,345,396	-		Sama_1918	0.47	-1.7
2,345,398	+		Sama_1918	0.47	-1.4
2,345,399	-		Sama_1918	0.47	+2.2
2,345,399	-		Sama_1918	0.47	-1.5
2,345,399	-		Sama_1918	0.47	-0.1
2,345,448	-		Sama_1918	0.51	+0.8
2,345,448	-		Sama_1918	0.51	+3.1
2,345,538	-		Sama_1918	0.59	-0.9
2,345,538	-		Sama_1918	0.59	-0.7
2,345,564	+		Sama_1918	0.61	-0.7
2,345,564	+		Sama_1918	0.61	-1.3
2,345,648	+		Sama_1918	0.68	-0.9
2,345,655	+		Sama_1918	0.68	-1.3
2,345,656	-		Sama_1918	0.68	+0.5
2,345,656	-		Sama_1918	0.68	+2.0
2,345,684	-		Sama_1918	0.71	+0.9
2,345,843	+		Sama_1918	0.84	-0.6
2,345,844	-		Sama_1918	0.84	-0.7
2,345,847	-		Sama_1918	0.84	-0.1
2,345,847	-		Sama_1918	0.84	+1.1
2,345,899	+		Sama_1918	0.88	+0.2
2,345,943	-				+1.4
2,345,943	-				+2.0
2,346,086	-				-0.1
2,346,088	+				-1.4
2,346,088	+				+0.3
2,346,089	-				-0.5
2,346,158	-				-0.7
2,346,172	+				-1.0
2,346,173	-				-0.1
2,346,299	-		Sama_1919	0.43	-0.1
2,346,346	+		Sama_1919	0.57	-0.5
2,346,347	-		Sama_1919	0.57	-1.7
2,346,542	+				+0.2
2,346,542	+				-0.5
2,346,542	+				-2.2
2,346,543	-				+0.9
2,346,543	-				-1.2
2,346,543	-				-1.3
2,346,544	+				-1.3
2,346,544	+				-0.1
2,346,544	+				-1.7
2,346,544	+				+1.5
2,346,544	+				+0.2
2,346,545	-				-1.3
2,346,545	-				+0.6
2,346,550	-				+0.1
2,346,586	+				+1.2
2,346,587	-				-0.7
2,346,600	+				+1.7
2,346,601	-				-2.4
2,346,622	+				+0.5