Strain Fitness in Shewanella amazonensis SB2B around Sama_1614

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,972,135	+		Sama_1613	0.51	+2.8
1,972,135	+		Sama_1613	0.51	-1.0
1,972,135	+		Sama_1613	0.51	+1.5
1,972,136	-		Sama_1613	0.51	+0.5
1,972,148	-		Sama_1613	0.54	-0.1
1,972,180	+		Sama_1613	0.60	+0.2
1,972,180	+		Sama_1613	0.60	-0.8
1,972,180	+		Sama_1613	0.60	+1.9
1,972,180	+		Sama_1613	0.60	+3.0
1,972,181	-		Sama_1613	0.60	-0.3
1,972,189	+		Sama_1613	0.62	+0.1
1,972,225	+		Sama_1613	0.69	+0.3
1,972,225	+		Sama_1613	0.69	-1.3
1,972,225	+		Sama_1613	0.69	+3.7
1,972,226	-		Sama_1613	0.70	+1.2
1,972,300	+		Sama_1613	0.85	+0.2
1,972,301	-		Sama_1613	0.85	+1.9
1,972,301	-		Sama_1613	0.85	+0.3
1,972,319	+		Sama_1613	0.88	-1.5
1,972,319	+		Sama_1613	0.88	+0.2
1,972,320	-		Sama_1613	0.89	+1.3
1,972,322	+		Sama_1613	0.89	-1.3
1,972,383	-				+1.3
1,972,418	-				+1.7
1,972,425	+				+0.2
1,972,426	-				+2.0
1,972,546	-				-0.5
1,972,679	-				-1.1
1,972,722	-				-1.2
1,972,724	+				+0.8
1,972,724	+				+3.8
1,972,725	-				+1.6
1,972,725	-				+1.0
1,972,725	-				+1.3
1,972,725	-				+1.6
1,972,769	+				-1.5
1,972,769	+				-0.1
1,972,845	+				+1.5
1,972,846	-				+1.3
1,972,889	-				+1.2
1,972,889	-				+0.8
1,972,892	+				+1.3
1,972,892	+				-0.3
1,972,892	+				-1.5
1,973,388	+				+0.5
1,973,389	-				-1.8
1,973,408	+				-0.9
1,973,522	-				+0.2
1,973,522	-				-2.0
1,973,525	-				-1.5
1,973,525	-				-2.8
1,973,525	-				+1.9
1,973,525	-				-0.8
1,973,525	-				-0.1
1,973,529	-				-1.5
1,973,570	-				+0.0
1,973,570	-				-0.7
1,973,588	-				-2.6
1,973,636	-				-1.1
1,973,659	-				+1.5
1,973,659	-				+1.0
1,973,659	-				+1.5
1,973,662	+				-1.3
1,973,662	+				-2.3
1,973,662	+				-0.8
1,973,662	+				+0.0
1,973,663	-				-1.0
1,973,697	-				-1.3
1,973,706	+				-0.1
1,973,707	-				+0.5
1,973,707	-				-0.6
1,973,855	+				-1.4
1,973,856	-				+0.7
1,973,869	+				-0.3
1,973,869	+				-0.7
1,973,870	-				-1.8
1,973,917	-		Sama_1615	0.11	-3.0
1,973,930	+		Sama_1615	0.11	+1.1
1,973,931	-		Sama_1615	0.11	+0.8
1,973,931	-		Sama_1615	0.11	+0.9
1,973,936	+		Sama_1615	0.11	-1.5
1,973,976	+		Sama_1615	0.12	-0.5
1,974,005	+		Sama_1615	0.13	+1.5
1,974,006	-		Sama_1615	0.13	-0.8
1,974,006	-		Sama_1615	0.13	+1.9
1,974,009	+		Sama_1615	0.13	-2.4
1,974,096	+		Sama_1615	0.15	-1.2
1,974,097	-		Sama_1615	0.15	+0.4
1,974,277	-		Sama_1615	0.20	+1.5
1,974,277	-		Sama_1615	0.20	+0.5
1,974,277	-		Sama_1615	0.20	-0.7