Strain Fitness in Shewanella amazonensis SB2B around Sama_1411

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,713,403	+				+0.6
1,713,464	+				-1.0
1,713,464	+				-2.7
1,713,464	+				-0.5
1,713,464	+				+1.8
1,713,468	+				+0.4
1,713,468	+				-2.6
1,713,508	+				-0.4
1,713,542	+				-2.9
1,715,057	-				-3.8
1,715,057	-				-0.4
1,715,086	+				-0.3
1,715,086	+				-0.0
1,715,117	+				-1.9
1,715,181	+				-0.7
1,715,182	-				+0.5
1,715,217	+				-1.7
1,715,218	-				-0.1
1,715,218	-				+1.2
1,715,275	+				+1.6
1,715,275	+				-1.7
1,715,276	-				-1.4
1,715,324	-				+0.8
1,715,335	+				-2.0
1,715,335	+				+1.2
1,715,335	+				+1.2
1,715,371	+				-1.6
1,715,371	+				-0.3
1,715,371	+				+1.4
1,715,372	-				-0.5
1,715,387	+				-1.4
1,715,387	+				-1.6
1,715,387	+				-1.6
1,715,388	-				+0.6
1,715,388	-				-2.1
1,715,411	-		Sama_1412	0.13	-0.4
1,715,462	-		Sama_1412	0.22	+0.2
1,715,500	+		Sama_1412	0.28	-2.0
1,715,509	+		Sama_1412	0.30	-0.7
1,715,554	+		Sama_1412	0.38	-0.4
1,715,597	+		Sama_1412	0.45	+0.6
1,715,597	+		Sama_1412	0.45	-1.2
1,715,598	-		Sama_1412	0.46	-2.5
1,715,607	+		Sama_1412	0.47	-0.2
1,715,608	-		Sama_1412	0.47	-0.0
1,715,626	+		Sama_1412	0.50	-0.5
1,715,626	+		Sama_1412	0.50	+2.2
1,715,627	-		Sama_1412	0.51	-0.7
1,715,675	-		Sama_1412	0.59	-0.5
1,715,714	+		Sama_1412	0.66	-1.2
1,715,726	+		Sama_1412	0.68	+3.9
1,715,726	+		Sama_1412	0.68	+0.6
1,715,743	+		Sama_1412	0.71	-0.7
1,715,841	-		Sama_1412	0.88	-1.2
1,715,880	-				+2.2
1,715,931	+				+2.6
1,715,931	+				+1.4
1,715,932	-				-0.7
1,715,938	+				-1.3
1,715,938	+				+2.4
1,715,938	+				-1.0
1,715,938	+				-1.7
1,715,938	+				+0.8
1,715,938	+				-0.2
1,715,939	-				-1.2
1,715,939	-				+0.9
1,715,939	-				-2.0
1,715,992	+				-1.2
1,715,993	-				-1.9
1,715,998	-				+1.1
1,716,009	+				+2.6
1,716,010	-				+0.6
1,716,027	-				+0.3
1,716,035	+				-1.2
1,716,043	+				-0.2
1,716,044	-				-0.3
1,716,044	-				-1.4
1,716,045	+				-1.2
1,716,045	+				-2.1
1,716,046	-				+2.7
1,716,046	-				-0.4