Strain Fitness in Shewanella amazonensis SB2B around Sama_1410

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,712,775	+		Sama_1409	0.56	-0.2
1,712,775	+		Sama_1409	0.56	-0.2
1,712,830	+		Sama_1409	0.59	+6.6
1,712,842	+		Sama_1409	0.60	+5.0
1,712,947	+		Sama_1409	0.66	+8.5
1,712,947	+		Sama_1409	0.66	+3.4
1,713,054	+		Sama_1409	0.73	+1.8
1,713,348	+				+2.0
1,713,352	+				+1.8
1,713,403	+				+0.6
1,713,464	+				-1.0
1,713,464	+				-2.7
1,713,464	+				-0.5
1,713,464	+				+1.8
1,713,468	+				+0.4
1,713,468	+				-2.6
1,713,508	+				-0.4
1,713,542	+				-2.9
1,715,057	-				-3.8
1,715,057	-				-0.4
1,715,086	+				-0.3
1,715,086	+				-0.0
1,715,117	+				-1.9
1,715,181	+				-0.7
1,715,182	-				+0.5
1,715,217	+				-1.7
1,715,218	-				-0.1
1,715,218	-				+1.2
1,715,275	+				+1.6
1,715,275	+				-1.7
1,715,276	-				-1.4
1,715,324	-				+0.8
1,715,335	+				-2.0
1,715,335	+				+1.2
1,715,335	+				+1.2