Strain Fitness in Shewanella amazonensis SB2B around Sama_1340

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,632,764	-				-0.7
1,632,764	-				-2.0
1,632,902	-				+0.2
1,632,943	+				-2.7
1,632,943	+				+3.0
1,632,943	+				+0.9
1,632,945	+				-0.8
1,632,945	+				-0.4
1,632,945	+				+3.0
1,632,945	+				-0.5
1,632,945	+				-1.8
1,632,946	-				-0.4
1,632,946	-				+1.4
1,632,946	-				+1.6
1,632,950	+				+0.4
1,632,950	+				-0.6
1,632,950	+				-0.2
1,632,951	-				+0.5
1,632,951	-				+1.0
1,632,951	-				-0.9
1,632,951	-				+0.8
1,632,970	+				+0.4
1,632,989	-				+1.6
1,633,016	+				+2.2
1,633,017	-				-1.8
1,633,288	+		Sama_1340	0.36	-1.5
1,633,371	+		Sama_1340	0.47	-0.1
1,633,372	-		Sama_1340	0.47	-0.5
1,633,451	+		Sama_1340	0.57	-2.4
1,633,451	+		Sama_1340	0.57	+1.9
1,633,451	+		Sama_1340	0.57	+2.9
1,633,451	+		Sama_1340	0.57	+2.5
1,633,451	+		Sama_1340	0.57	+0.8
1,633,451	+		Sama_1340	0.57	+0.1
1,633,451	+		Sama_1340	0.57	+1.6
1,633,546	+		Sama_1340	0.70	-2.6
1,633,735	+				+0.8
1,633,735	+				-0.2
1,633,735	+				-0.5
1,633,812	+				+1.1
1,633,812	+				-0.7
1,633,812	+				+1.1
1,633,813	-				-0.8
1,633,827	+		Sama_1341	0.12	+0.7
1,633,864	+		Sama_1341	0.20	+1.0
1,633,900	+		Sama_1341	0.27	-1.7
1,633,910	+		Sama_1341	0.30	+0.6
1,634,012	-		Sama_1341	0.51	+0.8
1,634,067	+		Sama_1341	0.63	-1.2
1,634,067	+		Sama_1341	0.63	+0.1
1,634,172	-		Sama_1341	0.85	+0.1
1,634,192	-		Sama_1341	0.89	+0.6
1,634,192	-		Sama_1341	0.89	+0.5
1,634,222	+				-1.2
1,634,222	+				+0.6
1,634,234	-				-1.9
1,634,262	+				-0.9
1,634,276	+				-1.2
1,634,276	+				+0.1
1,634,276	+				+1.7
1,634,277	-				-2.3
1,634,282	+				-1.3
1,634,282	+				+0.2
1,634,282	+				+0.1
1,634,283	-				+0.8
1,634,283	-				-1.0
1,634,283	-				+3.5
1,634,283	-				-1.4
1,634,283	-				-1.4
1,634,283	-				-0.4
1,634,283	-				-0.8
1,634,302	+				-0.4
1,634,302	+				-1.5
1,634,303	-				-1.3
1,634,303	-				-1.1
1,634,303	-				-2.8
1,634,303	-				+0.4
1,634,491	-				-0.8
1,634,617	-				-1.2
1,634,617	-				-0.9
1,634,666	+				-0.9
1,634,719	+				+0.6
1,634,760	+		Sama_1342	0.15	+0.6