Strain Fitness in Shewanella amazonensis SB2B around Sama_1316

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,598,917	-		Sama_1314	0.89	+0.9
1,598,929	+				-1.2
1,598,965	+				-1.7
1,599,030	+				+0.2
1,599,058	-				-0.9
1,599,080	+				-1.3
1,599,817	+				-1.2
1,599,862	+				-1.3
1,599,862	+				-0.3
1,600,941	-				-2.7
1,601,044	+				+0.2
1,601,044	+				+0.3
1,601,053	-				-1.3
1,601,127	+				+0.3
1,601,150	+				-0.3
1,601,184	+				+0.9
1,601,185	-				-0.2
1,601,185	-				-1.7
1,601,253	+				+0.7
1,601,253	+				-0.8
1,601,253	+				-1.3
1,601,253	+				+1.1
1,601,253	+				-1.3
1,601,253	+				-2.4
1,601,253	+				-2.2
1,601,254	-				-0.2
1,601,254	-				-1.2
1,601,254	-				-0.9
1,601,254	-				-0.7
1,601,254	-				-0.7
1,601,254	-				-0.9
1,601,254	-				-0.9
1,601,254	-				+1.7
1,601,254	-				-0.5
1,601,254	-				-0.2
1,601,256	-				-2.9
1,601,265	-				+0.9
1,601,323	-		Sama_1317	0.13	-0.5
1,601,399	+		Sama_1317	0.19	+1.1
1,601,400	-		Sama_1317	0.19	-0.7
1,601,432	+		Sama_1317	0.22	-0.3
1,601,433	-		Sama_1317	0.22	-0.6
1,601,446	+		Sama_1317	0.23	-0.0
1,601,447	-		Sama_1317	0.23	-0.2
1,601,454	+		Sama_1317	0.23	+3.1
1,601,454	+		Sama_1317	0.23	-0.9
1,601,454	+		Sama_1317	0.23	+1.0
1,601,455	-		Sama_1317	0.23	-0.2
1,601,455	-		Sama_1317	0.23	-0.3
1,601,523	+		Sama_1317	0.29	-1.3
1,601,523	+		Sama_1317	0.29	-0.5
1,601,524	-		Sama_1317	0.29	-1.2
1,601,529	+		Sama_1317	0.29	+1.7
1,601,530	-		Sama_1317	0.29	-1.8
1,601,535	+		Sama_1317	0.29	+1.7
1,601,535	+		Sama_1317	0.29	-2.2
1,601,536	-		Sama_1317	0.30	+1.7
1,601,536	-		Sama_1317	0.30	+1.7
1,601,595	-		Sama_1317	0.34	-1.2
1,601,636	+		Sama_1317	0.37	-2.3
1,601,685	-		Sama_1317	0.41	+0.6
1,601,879	+		Sama_1317	0.56	+0.2