Strain Fitness in Shewanella amazonensis SB2B around Sama_1291

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,577,372	+				-0.9
1,577,506	-				+1.2
1,577,506	-				+1.2
1,577,524	+				-1.8
1,577,524	+				+1.0
1,577,526	+				+0.8
1,577,526	+				-0.9
1,577,527	-				+0.2
1,577,527	-				+0.7
1,577,527	-				-0.3
1,577,549	+				+1.1
1,577,550	-				-0.6
1,577,550	-				+2.9
1,577,603	+				-1.9
1,577,604	-				-0.3
1,577,607	-				+0.8
1,577,623	+				-0.3
1,577,624	-				-2.3
1,577,647	+				+0.6
1,577,647	+				-1.3
1,577,647	+				-0.9
1,577,648	-				-0.6
1,577,684	-		Sama_1290	0.12	-2.7
1,577,846	+		Sama_1290	0.35	-0.5
1,577,955	+		Sama_1290	0.50	+1.8
1,577,955	+		Sama_1290	0.50	+0.3
1,577,956	-		Sama_1290	0.50	-0.5
1,577,982	+		Sama_1290	0.54	+1.1
1,577,983	-		Sama_1290	0.54	-0.6
1,577,994	-		Sama_1290	0.55	+0.1
1,578,012	+		Sama_1290	0.58	-1.3
1,578,012	+		Sama_1290	0.58	-0.7
1,578,012	+		Sama_1290	0.58	-0.3
1,578,012	+		Sama_1290	0.58	+0.7
1,578,012	+		Sama_1290	0.58	-1.5
1,578,012	+		Sama_1290	0.58	-0.7
1,578,012	+		Sama_1290	0.58	-1.9
1,578,012	+		Sama_1290	0.58	-0.7
1,578,012	+		Sama_1290	0.58	-0.9
1,578,013	-		Sama_1290	0.58	-0.8
1,578,013	-		Sama_1290	0.58	+0.3
1,578,013	-		Sama_1290	0.58	-1.7
1,578,013	-		Sama_1290	0.58	+0.4
1,578,013	-		Sama_1290	0.58	-0.3
1,578,013	-		Sama_1290	0.58	-0.5
1,578,024	-		Sama_1290	0.59	-2.9
1,578,054	+		Sama_1290	0.63	+0.7
1,578,054	+		Sama_1290	0.63	-0.7
1,578,055	-		Sama_1290	0.64	+0.7
1,578,065	+		Sama_1290	0.65	-3.3
1,578,065	+		Sama_1290	0.65	+0.5
1,578,065	+		Sama_1290	0.65	-1.7
1,578,065	+		Sama_1290	0.65	+1.5
1,578,065	+		Sama_1290	0.65	-2.0
1,578,065	+		Sama_1290	0.65	+0.1
1,578,065	+		Sama_1290	0.65	-1.3
1,578,065	+		Sama_1290	0.65	-0.0
1,578,065	+		Sama_1290	0.65	-1.5
1,578,065	+		Sama_1290	0.65	-1.7
1,578,065	+		Sama_1290	0.65	-0.1
1,578,066	-		Sama_1290	0.65	+0.7
1,578,066	-		Sama_1290	0.65	-0.9
1,578,066	-		Sama_1290	0.65	+0.5
1,578,066	-		Sama_1290	0.65	+0.1
1,578,112	-		Sama_1290	0.72	-1.3
1,578,180	-		Sama_1290	0.81	-1.3
1,578,182	+		Sama_1290	0.81	-0.8
1,578,185	+		Sama_1290	0.82	-2.5
1,578,185	+		Sama_1290	0.82	-1.1
1,578,185	+		Sama_1290	0.82	-1.3
1,578,185	+		Sama_1290	0.82	-1.2
1,578,186	-		Sama_1290	0.82	-3.0
1,578,218	-		Sama_1290	0.86	-0.9
1,578,226	+		Sama_1290	0.87	-0.3
1,578,226	+		Sama_1290	0.87	-0.6
1,578,227	-		Sama_1290	0.87	-2.7
1,578,230	+		Sama_1290	0.88	-0.3
1,578,244	+		Sama_1290	0.90	-0.0
1,578,315	+				-1.7
1,578,657	-		Sama_1291	0.37	-1.2
1,578,920	+		Sama_1291	0.69	+1.2
1,578,921	-		Sama_1291	0.69	+0.1
1,579,165	+				-0.1
1,579,165	+				+2.2
1,579,166	-				+0.1
1,579,166	-				-0.3
1,579,166	-				-0.3
1,579,198	+				-0.7
1,579,198	+				+0.3
1,579,198	+				-1.7
1,579,199	-				-0.9
1,579,199	-				-0.8
1,579,199	-				-1.8
1,579,199	-				-1.8
1,579,206	+				-1.8
1,579,230	+				-0.6
1,579,231	-				-1.2
1,579,251	+				+0.8
1,579,252	-				+0.3
1,579,402	+				-1.7
1,579,402	+				-1.2
1,579,402	+				+1.1
1,579,453	+		Sama_1292	0.19	+1.1
1,579,484	+		Sama_1292	0.26	+0.6
1,579,484	+		Sama_1292	0.26	+0.6
1,579,586	+		Sama_1292	0.48	+1.0
1,579,651	+		Sama_1292	0.62	-3.7
1,579,651	+		Sama_1292	0.62	+0.7
1,579,651	+		Sama_1292	0.62	+1.6
1,579,651	+		Sama_1292	0.62	-2.3
1,579,732	+		Sama_1292	0.80	-2.2
1,579,772	+		Sama_1292	0.88	+0.4
1,579,772	+		Sama_1292	0.88	+0.7
1,579,772	+		Sama_1292	0.88	+0.7
1,579,772	+		Sama_1292	0.88	+0.9
1,579,797	+				-1.3