Strain Fitness in Shewanella amazonensis SB2B around Sama_1155

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,407,588	+				+1.1
1,409,103	-				+2.2
1,409,103	-				-1.1
1,409,103	-				-1.2
1,409,106	-				+1.7
1,409,114	+				-0.1
1,409,253	+				-1.0
1,409,253	+				+0.9
1,409,253	+				-2.3
1,409,254	-				-1.1
1,409,254	-				+1.3
1,409,254	-				-0.8
1,409,254	-				-0.6
1,409,254	-				-0.0
1,409,254	-				-1.7
1,409,254	-				+1.1
1,409,254	-				-0.1
1,409,254	-				-0.3
1,409,254	-				-0.3
1,409,370	+		Sama_1156	0.19	-1.3
1,409,371	-		Sama_1156	0.19	-1.7
1,409,391	-		Sama_1156	0.21	+1.0
1,409,408	+		Sama_1156	0.23	-1.4
1,409,408	+		Sama_1156	0.23	+1.7
1,409,408	+		Sama_1156	0.23	-1.4
1,409,409	-		Sama_1156	0.23	+4.6
1,409,409	-		Sama_1156	0.23	+0.7
1,409,409	-		Sama_1156	0.23	-0.2
1,409,409	-		Sama_1156	0.23	+0.5
1,409,412	+		Sama_1156	0.23	-0.8
1,409,413	-		Sama_1156	0.23	-0.3
1,409,413	-		Sama_1156	0.23	+0.7
1,409,413	-		Sama_1156	0.23	+2.0
1,409,506	+		Sama_1156	0.32	-0.3
1,409,542	+		Sama_1156	0.35	+0.6
1,409,543	-		Sama_1156	0.35	+0.1
1,409,554	+		Sama_1156	0.36	+1.2
1,409,554	+		Sama_1156	0.36	-1.1
1,409,555	-		Sama_1156	0.36	+1.6
1,409,649	+		Sama_1156	0.44	-0.7
1,409,650	-		Sama_1156	0.45	+0.5
1,409,650	-		Sama_1156	0.45	+1.0
1,409,650	-		Sama_1156	0.45	+1.6
1,409,650	-		Sama_1156	0.45	-1.9
1,409,687	+		Sama_1156	0.48	+0.9
1,409,687	+		Sama_1156	0.48	+1.7
1,409,776	-		Sama_1156	0.56	-0.2
1,409,776	-		Sama_1156	0.56	+0.3
1,409,797	+		Sama_1156	0.58	+0.5
1,409,797	+		Sama_1156	0.58	+0.3
1,409,798	-		Sama_1156	0.58	+2.6
1,409,798	-		Sama_1156	0.58	+1.0
1,409,798	-		Sama_1156	0.58	+0.1
1,409,798	-		Sama_1156	0.58	-0.6
1,409,857	-		Sama_1156	0.63	-0.3
1,409,857	-		Sama_1156	0.63	-2.1
1,409,857	-		Sama_1156	0.63	+0.1
1,409,880	-		Sama_1156	0.65	-1.1
1,409,885	-		Sama_1156	0.66	-0.4
1,409,885	-		Sama_1156	0.66	-2.3
1,409,885	-		Sama_1156	0.66	+1.0
1,409,885	-		Sama_1156	0.66	-2.3
1,409,887	-		Sama_1156	0.66	-1.0
1,409,956	-		Sama_1156	0.72	+3.0
1,409,956	-		Sama_1156	0.72	+1.1
1,409,956	-		Sama_1156	0.72	-1.6
1,410,045	+		Sama_1156	0.80	-0.3
1,410,045	+		Sama_1156	0.80	+1.6
1,410,046	-		Sama_1156	0.80	+0.4
1,410,046	-		Sama_1156	0.80	-0.6
1,410,064	+		Sama_1156	0.82	+0.7
1,410,064	+		Sama_1156	0.82	-0.9
1,410,064	+		Sama_1156	0.82	-0.0
1,410,065	-		Sama_1156	0.82	+0.8
1,410,090	+		Sama_1156	0.84	+2.6
1,410,090	+		Sama_1156	0.84	-2.2