Strain Fitness in Shewanella amazonensis SB2B around Sama_0921

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,112,380	+		Sama_0919	0.70	-2.1
1,112,381	-		Sama_0919	0.70	+1.1
1,112,395	-		Sama_0919	0.71	-1.6
1,112,440	+		Sama_0919	0.74	-2.6
1,112,441	-		Sama_0919	0.74	+0.7
1,112,441	-		Sama_0919	0.74	-0.2
1,112,443	-		Sama_0919	0.74	+0.9
1,112,443	-		Sama_0919	0.74	-1.9
1,112,488	+		Sama_0919	0.77	-0.2
1,112,489	-		Sama_0919	0.77	+0.5
1,112,489	-		Sama_0919	0.77	+1.9
1,112,544	+		Sama_0919	0.81	-1.3
1,112,544	+		Sama_0919	0.81	-1.2
1,112,544	+		Sama_0919	0.81	+0.3
1,112,544	+		Sama_0919	0.81	+1.0
1,112,545	-		Sama_0919	0.81	-1.1
1,112,546	+		Sama_0919	0.81	+0.6
1,112,546	+		Sama_0919	0.81	-0.5
1,112,546	+		Sama_0919	0.81	-1.2
1,112,604	+		Sama_0919	0.86	+0.6
1,112,604	+		Sama_0919	0.86	-0.5
1,112,604	+		Sama_0919	0.86	-0.2
1,112,656	+		Sama_0919	0.89	-1.9
1,112,656	+		Sama_0919	0.89	+0.1
1,112,657	-		Sama_0919	0.89	+1.2
1,112,657	-		Sama_0919	0.89	-1.0
1,112,657	-		Sama_0919	0.89	-1.7
1,112,722	+				+0.2
1,112,722	+				+0.2
1,112,723	-				-0.2
1,112,723	-				+0.5
1,112,723	-				-2.2
1,112,723	-				-0.5
1,112,790	+				-0.4
1,112,790	+				+1.1
1,112,790	+				-1.6
1,112,791	-				+0.3
1,112,791	-				+0.2
1,112,823	-				+1.5
1,112,826	-				+0.2
1,112,829	+				-1.3
1,112,829	+				-0.3
1,112,889	+				-0.5
1,112,889	+				+3.3
1,112,900	+				-1.4
1,112,900	+				+0.1
1,112,901	-				-1.1
1,112,902	+				+2.7
1,112,902	+				+0.5
1,112,902	+				+2.6
1,112,902	-				-1.6
1,112,903	-				+1.1
1,112,903	-				+0.8
1,112,903	-				+2.3
1,112,903	-				-0.4
1,112,905	+				+2.0
1,112,921	-				-0.9
1,112,923	+				+0.8
1,112,924	-				+2.0
1,112,946	+				-1.0
1,112,954	+				-2.9
1,112,954	+				+0.9
1,112,954	+				+0.0
1,112,981	+		Sama_0920	0.13	+0.2
1,112,991	-		Sama_0920	0.17	+2.5
1,113,087	-		Sama_0920	0.49	-2.0
1,113,087	-		Sama_0920	0.49	+0.8
1,113,132	+		Sama_0920	0.64	+1.8
1,113,132	+		Sama_0920	0.64	-0.2
1,113,133	-		Sama_0920	0.65	+0.2
1,113,168	-		Sama_0920	0.76	+2.4
1,113,194	+		Sama_0920	0.85	+1.5
1,113,219	+				+0.7
1,113,226	+				+2.8
1,113,226	+				+0.4
1,113,226	+				-0.3
1,113,226	+				-1.5
1,113,226	+				+4.1
1,113,227	-				-0.2
1,113,227	-				-2.5
1,113,227	-				+1.0
1,113,227	-				+0.5