Strain Fitness in Shewanella amazonensis SB2B around Sama_0878

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
1,065,925	+		Sama_0876	0.58	-1.0
1,065,925	+		Sama_0876	0.58	+0.5
1,065,925	+		Sama_0876	0.58	-0.2
1,065,926	-		Sama_0876	0.58	-0.5
1,065,931	+		Sama_0876	0.58	-1.3
1,065,931	+		Sama_0876	0.58	-0.2
1,065,931	+		Sama_0876	0.58	-0.5
1,065,931	+		Sama_0876	0.58	-1.2
1,065,931	+		Sama_0876	0.58	-1.5
1,065,932	-		Sama_0876	0.58	-0.7
1,065,998	+		Sama_0876	0.65	-1.5
1,066,142	+		Sama_0876	0.81	-0.7
1,066,142	+		Sama_0876	0.81	-1.6
1,066,142	+		Sama_0876	0.81	+0.6
1,066,152	+		Sama_0876	0.82	-0.2
1,066,152	+		Sama_0876	0.82	-1.0
1,066,152	+		Sama_0876	0.82	-0.2
1,066,152	+		Sama_0876	0.82	+0.0
1,066,152	+		Sama_0876	0.82	-0.2
1,066,786	+				-0.5
1,066,786	+				-2.3
1,066,787	-				+1.6
1,066,821	-				-0.2
1,066,966	+				+0.7
1,067,056	+				-0.5
1,067,150	+		Sama_0878	0.14	-1.5
1,067,157	+		Sama_0878	0.15	-1.0
1,067,217	+		Sama_0878	0.18	-0.2
1,067,217	+		Sama_0878	0.18	-1.6
1,067,343	+		Sama_0878	0.25	+0.3
1,067,409	+		Sama_0878	0.29	-0.2
1,067,501	+		Sama_0878	0.34	-1.0
1,067,501	+		Sama_0878	0.34	-2.2
1,067,575	+		Sama_0878	0.38	-1.2
1,067,589	-		Sama_0878	0.39	+0.3
1,067,794	+		Sama_0878	0.50	-0.5
1,067,969	+		Sama_0878	0.60	-1.9
1,068,310	+		Sama_0878	0.79	-0.2
1,068,418	+		Sama_0878	0.85	-0.7
1,068,418	+		Sama_0878	0.85	-2.0
1,068,419	-		Sama_0878	0.85	-0.5
1,068,493	+		Sama_0878	0.89	-1.7
1,068,532	+				+0.8
1,068,607	+				-1.0
1,068,697	+				-0.4
1,068,697	+				-1.3
1,068,697	+				-1.3
1,068,709	+				-1.2
1,068,720	+				+0.8
1,068,720	+				-0.2
1,068,735	+				-0.3