Strain Fitness in Shewanella amazonensis SB2B around Sama_0745

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
914,989	-				-1.5
915,061	+				-1.1
915,061	+				-2.2
915,075	-				-0.4
915,075	-				+1.6
915,082	+				+0.8
915,082	+				+0.4
915,082	+				-1.4
915,083	-				-1.0
915,083	-				-0.7
915,083	-				-1.5
915,176	+				-0.7
915,176	+				-0.9
915,176	+				-0.4
915,176	+				+0.6
915,176	+				+0.1
915,176	+				-1.9
915,176	+				+0.7
915,176	+				-0.4
915,176	+				+1.3
915,177	-				-0.9
915,177	-				+0.9
915,177	-				+2.8
915,177	-				-1.2
915,181	-				-1.3
915,211	-				-0.7
915,216	+				-0.5
915,216	+				+0.4
915,216	+				-1.8
915,217	-				+0.9
915,217	-				+0.3
915,217	-				-2.8
915,217	-				-2.0
915,217	-				-1.3
915,217	-				+0.0
915,274	+				-0.7
915,274	+				+0.5
915,275	-				+1.3
915,351	+				-0.2
915,352	-				-0.1
915,363	+				+0.8
915,377	+				+0.6
915,377	+				+0.9
915,377	+				+0.9
915,377	+				-0.9
915,378	-				+0.8
915,378	-				-1.0
915,378	-				+1.2
915,378	-				-1.8
915,378	-				+1.2
915,378	-				-1.3
915,378	-				-0.0
915,378	-				+0.6
915,443	+				-1.7
915,443	+				-0.9
915,443	+				-1.5
915,490	+				+0.3
915,491	-				+2.1
915,499	+				-0.4
915,499	+				-1.5
915,500	-				+1.1
915,521	-				-0.5
915,521	-				-2.1
915,523	+				+1.1
915,523	+				+0.1
915,524	-				-2.2
915,524	-				+0.3
915,582	-				-1.4
915,595	+				+0.3
915,664	+				-0.5
915,678	-				-0.6
915,678	-				-1.4
915,678	-				-1.1
915,679	+				+1.7
915,679	+				-0.1
915,679	+				+1.8
915,679	+				-1.7
915,679	+				+0.6
915,679	+				-0.7
915,679	+				+0.3
915,679	+				-1.1
915,680	-				-2.7
915,680	-				-0.9
915,680	-				+0.6
915,692	+				+0.3
915,776	+				-0.6
915,819	+				-0.1
915,820	-				-1.8
915,825	-				-1.4
915,827	-				-2.1
915,827	-				+0.3
915,855	-				+1.7
915,858	+				+0.7
915,908	+				+1.7
915,908	+				-0.9
915,908	+				+1.9
915,908	+				-1.4
915,908	+				+0.5
915,908	+				-1.3
915,908	+				+0.5
915,908	+				-1.4
915,908	+				+1.5
915,908	+				-1.2
915,909	-				-0.3
915,909	-				-1.9
915,909	-				-0.4
915,909	-				+0.8
915,909	-				+0.7
915,909	-				-2.2
915,909	-				-0.7
915,909	-				+0.4
915,909	-				+0.4
915,909	-				-0.0
915,912	+				-0.8
915,913	-				+1.1
915,934	+				+3.1
915,934	+				-0.9
915,934	+				+1.3
915,934	+				+0.7
915,934	+				-0.2
915,934	+				-1.0
915,935	-				-1.1
915,935	-				+0.4
915,935	-				+1.2
915,954	+				+0.5
915,954	+				-1.7
915,954	+				-0.7
915,954	+				+0.6
915,955	-				-0.5
915,955	-				-0.3
915,995	+				-0.9
915,995	+				+0.7
915,995	+				+1.5
915,995	+				+0.5
915,995	+				-0.5
915,996	-				+0.2
915,996	-				+0.2
915,996	-				-1.9
916,268	-		Sama_0745	0.16	-0.3
916,322	+		Sama_0745	0.19	+0.9
916,322	+		Sama_0745	0.19	-0.7
916,344	+		Sama_0745	0.20	-0.5
916,416	+		Sama_0745	0.23	-1.9
916,417	-		Sama_0745	0.23	-1.7
916,448	+		Sama_0745	0.24	+0.6
916,449	-		Sama_0745	0.24	+0.6
916,482	+		Sama_0745	0.26	-0.9
916,482	+		Sama_0745	0.26	-1.4
916,498	+		Sama_0745	0.27	+0.3
916,498	+		Sama_0745	0.27	+2.1
916,499	-		Sama_0745	0.27	+0.3
916,665	+		Sama_0745	0.34	+0.2
916,665	+		Sama_0745	0.34	-2.4
916,665	+		Sama_0745	0.34	-1.3
916,665	+		Sama_0745	0.34	-1.2
916,665	+		Sama_0745	0.34	-1.3
916,666	-		Sama_0745	0.34	+1.2
916,666	-		Sama_0745	0.34	-1.3
916,666	-		Sama_0745	0.34	+0.9
916,704	+		Sama_0745	0.36	+0.8
916,704	+		Sama_0745	0.36	-0.1
916,705	-		Sama_0745	0.36	+0.3
916,708	+		Sama_0745	0.36	-0.4
916,708	+		Sama_0745	0.36	-1.2
916,708	+		Sama_0745	0.36	+1.2
916,708	+		Sama_0745	0.36	-0.2
916,709	-		Sama_0745	0.36	+0.7
916,709	-		Sama_0745	0.36	-0.4
916,709	-		Sama_0745	0.36	-0.2
916,709	-		Sama_0745	0.36	+0.6
916,709	-		Sama_0745	0.36	-1.1
916,709	-		Sama_0745	0.36	+1.7
916,709	-		Sama_0745	0.36	-2.0
916,834	+		Sama_0745	0.42	+0.5
916,834	+		Sama_0745	0.42	-0.3
916,834	+		Sama_0745	0.42	+0.3
916,835	-		Sama_0745	0.42	-0.5
916,835	-		Sama_0745	0.42	+0.5
916,835	-		Sama_0745	0.42	-0.9
916,835	-		Sama_0745	0.42	+3.3
916,835	-		Sama_0745	0.42	+0.9
916,933	-		Sama_0745	0.46	-0.2
916,959	-		Sama_0745	0.47	-2.6
917,121	-		Sama_0745	0.55	-1.0
917,121	-		Sama_0745	0.55	+1.7
917,121	-		Sama_0745	0.55	-1.8
917,136	-		Sama_0745	0.55	+0.9
917,317	+		Sama_0745	0.64	-1.0
917,447	+		Sama_0745	0.69	+0.2
917,448	-		Sama_0745	0.70	-3.1
917,448	-		Sama_0745	0.70	-0.2
917,448	-		Sama_0745	0.70	+1.3
917,669	+		Sama_0745	0.79	+0.2
917,796	-		Sama_0745	0.85	+1.0
917,797	+		Sama_0745	0.85	-1.7
917,797	+		Sama_0745	0.85	-0.4
917,797	+		Sama_0745	0.85	+0.4
917,797	+		Sama_0745	0.85	-1.4
917,797	+		Sama_0745	0.85	-2.2
917,797	+		Sama_0745	0.85	-2.4
917,797	+		Sama_0745	0.85	-0.7
917,798	-		Sama_0745	0.85	+1.6
917,798	-		Sama_0745	0.85	-3.4
917,798	-		Sama_0745	0.85	-1.8
917,798	-		Sama_0745	0.85	-0.1
917,798	-		Sama_0745	0.85	+0.4
917,798	-		Sama_0745	0.85	-1.5
917,798	-		Sama_0745	0.85	-0.6
917,798	-		Sama_0745	0.85	-0.1
917,798	-		Sama_0745	0.85	-0.4
917,840	+		Sama_0745	0.87	-1.3
917,841	-		Sama_0745	0.87	-0.3
917,906	-				-1.5
917,942	+				-2.0
917,942	+				-0.5
917,948	+				-0.5
917,948	+				-1.2
917,948	+				-0.9
917,948	+				-1.9
917,949	-				+1.3
917,949	-				+0.9
917,949	-				+0.4
917,961	-				-0.4
918,023	+				-0.1
918,023	+				-1.9
918,023	+				-0.9
918,024	-				-1.4
918,024	-				+0.7
918,024	-				+1.0
918,129	+				-1.0
918,130	-				-0.8
918,130	-				-2.7
918,156	+				+0.1
918,156	+				+0.0
918,156	+				-0.9
918,175	+				-1.5
918,175	+				-2.0
918,175	+				-1.9
918,175	+				+0.5
918,175	+				-1.8
918,175	+				-0.7
918,176	-				-1.1
918,176	-				+0.1
918,176	-				+1.6
918,176	-				+0.6
918,176	-				-2.5
918,176	-				-1.7
918,177	+				-1.7
918,177	+				-1.5
918,177	+				-0.3
918,177	+				-0.0
918,177	+				-0.2
918,177	+				-1.3
918,177	+				+0.6
918,177	+				-1.5
918,177	+				-2.3
918,177	+				-3.1
918,177	+				-2.4
918,177	+				-2.3
918,177	+				-1.8
918,178	-				-2.0
918,178	-				-0.7
918,178	-				+0.3
918,178	-				-0.9
918,178	-				-0.7
918,178	-				-0.1
918,235	+				-0.7
918,236	-				+1.7
918,236	-				-0.2
918,236	-				+1.0
918,260	+				-2.7
918,261	-				+0.3
918,267	+				-0.7
918,268	-				+0.0
918,273	+				-0.4
918,290	+				+0.5
918,299	-				+1.3
918,407	+				-2.3
918,407	+				-0.7
918,407	+				+0.5
918,407	+				+3.3
918,407	+				+0.9
918,407	+				-2.6
918,407	+				+0.1
918,407	+				-0.7
918,407	+				+1.2
918,407	+				+0.9
918,407	+				-1.1
918,407	+				+2.1
918,407	+				-0.9
918,407	+				-0.9
918,407	+				+0.9
918,407	+				+1.5
918,408	-				-0.2
918,408	-				+1.4
918,408	-				+0.6
918,408	-				+1.5
918,408	-				+0.9
918,408	-				-1.5
918,408	-				+0.8
918,408	-				+0.8
918,408	-				+1.2
918,408	-				+1.2
918,441	+				+1.0
918,442	-				+1.2
918,455	+				-1.5
918,456	-				+1.0
918,456	-				+1.5
918,497	+				+0.0
918,515	-				-0.7
918,523	+				+1.2
918,690	+		Sama_0746	0.14	-0.9
918,719	-		Sama_0746	0.17	-1.5
918,719	-		Sama_0746	0.17	-2.3
918,719	-		Sama_0746	0.17	-0.3
918,719	-		Sama_0746	0.17	+2.3
918,719	-		Sama_0746	0.17	+0.8
918,787	+		Sama_0746	0.25	+1.2
918,788	-		Sama_0746	0.25	+0.4
918,818	+		Sama_0746	0.29	-1.7
918,819	-		Sama_0746	0.29	-1.0
918,843	-		Sama_0746	0.31	+1.8
918,963	+		Sama_0746	0.45	+0.5
918,963	+		Sama_0746	0.45	+2.5
918,993	+		Sama_0746	0.48	-0.2
919,007	-		Sama_0746	0.50	-0.4
919,067	+		Sama_0746	0.56	+1.9
919,067	+		Sama_0746	0.56	+1.6
919,068	-		Sama_0746	0.56	-1.3
919,068	-		Sama_0746	0.56	-0.9
919,068	-		Sama_0746	0.56	-1.3
919,089	+		Sama_0746	0.59	+0.9
919,089	+		Sama_0746	0.59	-1.1
919,089	+		Sama_0746	0.59	+1.6
919,090	-		Sama_0746	0.59	-0.9
919,090	-		Sama_0746	0.59	-3.2