Strain Fitness in Shewanella amazonensis SB2B around Sama_0064

Experiment: Motility assay, center cut sample 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility assay, center cut sample 1
69,079	+				+0.0
69,089	-				-0.7
69,110	+				+0.4
69,110	+				-1.6
69,110	+				+1.0
69,110	+				+1.0
69,110	+				-0.4
69,111	-				-0.0
69,111	-				+1.7
69,111	-				+2.0
69,111	-				-0.3
69,111	-				-0.1
69,111	-				-2.7
69,143	-				+0.4
69,208	+				-0.7
69,208	+				-3.0
69,208	+				-0.5
69,208	+				-1.5
69,209	-				-0.7
69,209	-				-1.3
69,209	-				+2.9
69,209	-				-1.3
69,209	-				+1.4
69,209	-				+0.5
69,209	-				+1.9
69,209	-				+0.8
69,209	-				-1.7
69,209	-				-2.0
69,209	-				-0.7
69,209	-				-0.2
69,209	-				+0.9
69,289	+		Sama_0064	0.11	+0.3
69,310	+		Sama_0064	0.13	-0.5
69,311	-		Sama_0064	0.13	-0.3
69,311	-		Sama_0064	0.13	-0.1
69,344	+		Sama_0064	0.16	-0.3
69,345	-		Sama_0064	0.16	+0.2
69,345	+		Sama_0064	0.16	+0.5
69,369	+		Sama_0064	0.18	+0.3
69,406	+		Sama_0064	0.21	-1.1
69,407	-		Sama_0064	0.21	+1.7
69,407	-		Sama_0064	0.21	+1.0
69,437	+		Sama_0064	0.24	+1.0
69,489	+		Sama_0064	0.28	-1.1
69,489	+		Sama_0064	0.28	-0.3
69,489	+		Sama_0064	0.28	-1.9
69,489	+		Sama_0064	0.28	+0.0
69,490	-		Sama_0064	0.28	+0.3
69,490	-		Sama_0064	0.28	-1.7
69,528	+		Sama_0064	0.31	-2.0
69,556	+		Sama_0064	0.34	-1.0
69,556	+		Sama_0064	0.34	+0.2
69,556	+		Sama_0064	0.34	-2.4
69,556	+		Sama_0064	0.34	+0.1
69,719	-		Sama_0064	0.47	-1.1
69,719	-		Sama_0064	0.47	-0.3
69,846	+		Sama_0064	0.58	-2.1
69,846	+		Sama_0064	0.58	+1.5
69,847	-		Sama_0064	0.58	-1.0
69,847	-		Sama_0064	0.58	-1.1
69,847	-		Sama_0064	0.58	-0.3
69,851	-		Sama_0064	0.59	-0.8
69,851	-		Sama_0064	0.59	-0.8
69,851	-		Sama_0064	0.59	+1.1
69,851	-		Sama_0064	0.59	-1.4
69,851	-		Sama_0064	0.59	-0.4
69,880	-		Sama_0064	0.61	+0.6
69,897	-		Sama_0064	0.62	-1.3
69,924	+		Sama_0064	0.65	-1.7
69,924	+		Sama_0064	0.65	-0.1
69,924	+		Sama_0064	0.65	-1.1
69,924	+		Sama_0064	0.65	-0.5
69,924	+		Sama_0064	0.65	-1.6
69,924	+		Sama_0064	0.65	+0.4
69,924	+		Sama_0064	0.65	-1.0
69,924	+		Sama_0064	0.65	+0.5
69,924	+		Sama_0064	0.65	+0.3
69,924	+		Sama_0064	0.65	-1.0
69,924	+		Sama_0064	0.65	+1.4
69,924	+		Sama_0064	0.65	-0.3
69,924	+		Sama_0064	0.65	+1.4
69,925	-		Sama_0064	0.65	-1.1
69,925	-		Sama_0064	0.65	-1.5
69,925	-		Sama_0064	0.65	-0.6
69,925	-		Sama_0064	0.65	+0.7
69,925	-		Sama_0064	0.65	-1.1
69,925	-		Sama_0064	0.65	-2.0
69,925	-		Sama_0064	0.65	-2.1
69,925	-		Sama_0064	0.65	+0.4
69,925	-		Sama_0064	0.65	-0.8
69,925	-		Sama_0064	0.65	-1.7
69,925	-		Sama_0064	0.65	+0.6
69,925	-		Sama_0064	0.65	-2.9
69,925	-		Sama_0064	0.65	+0.0
69,925	-		Sama_0064	0.65	-0.6
70,008	+		Sama_0064	0.72	-1.7
70,053	+		Sama_0064	0.75	-1.5
70,053	+		Sama_0064	0.75	-0.3
70,053	+		Sama_0064	0.75	-0.0
70,053	+		Sama_0064	0.75	-0.4
70,053	+		Sama_0064	0.75	-0.5
70,053	+		Sama_0064	0.75	-1.8
70,053	+		Sama_0064	0.75	-1.4
70,054	-		Sama_0064	0.76	-1.0
70,054	-		Sama_0064	0.76	+1.4
70,054	-		Sama_0064	0.76	-2.0
70,070	-		Sama_0064	0.77	+0.5
70,118	+		Sama_0064	0.81	-0.0
70,119	-		Sama_0064	0.81	+0.0
70,119	-		Sama_0064	0.81	-1.6
70,119	-		Sama_0064	0.81	-0.5
70,195	+		Sama_0064	0.87	+0.3
70,196	-		Sama_0064	0.87	+1.6
70,247	+				-1.1
70,247	+				-0.9
70,248	-				-1.9
70,292	+				+1.5
70,344	-				+2.0
70,367	+				-1.0
70,404	+				-1.4
70,404	+				-0.5
70,405	-				+1.3
70,405	-				-0.8
70,405	-				-0.3
70,405	-				+1.2
70,405	-				-0.8
70,496	+				-1.2
70,496	+				-0.2
70,497	-				-1.1
70,497	-				-0.5
70,497	-				+1.2
70,497	-				+0.6
70,541	+				+1.3
70,577	+				+1.0
70,598	-				-1.1
70,656	+				-1.7
70,656	+				+0.7
70,656	+				-2.3
70,656	+				+1.8
70,656	+				+2.1
70,656	+				-1.4
70,656	+				+1.4
70,657	-				-1.1
70,657	-				-1.8
70,657	-				-0.3
70,657	-				-0.7
70,657	-				-1.4
70,657	-				-0.2
70,657	-				-0.8
70,657	-				-1.3
70,657	-				+2.8
70,657	-				+1.9
70,657	-				+1.2
70,657	-				-0.9
70,684	+				+2.2
70,684	+				-0.5
70,684	+				-0.2
70,685	-				+0.3
70,691	+				+2.0
70,691	+				-1.0
70,692	-				+0.8
70,727	+				-1.9
70,728	-				-0.8
70,728	-				-0.5
70,751	+				-1.8
70,751	+				+0.9
70,751	+				-0.5
70,751	+				-0.7
70,751	+				-1.4
70,752	-				-1.1
70,753	+				+0.9
70,753	+				-1.3
70,753	+				+0.9
70,753	+				+0.7
70,753	+				+0.2
70,753	+				-2.8
70,753	+				+2.0
70,753	+				-1.2
70,753	+				-0.8
70,753	+				-0.3
70,753	+				-0.9
70,753	+				+0.4
70,753	+				-2.3
70,753	+				+0.4
70,753	+				+0.7
70,753	+				+1.0
70,753	+				+0.3
70,753	+				-1.9
70,753	+				-1.2
70,754	-				+0.7
70,754	-				-2.1
70,754	-				-1.5
70,754	-				+0.2
70,754	-				-2.6
70,754	-				-3.3
70,754	-				+1.5
70,754	-				+2.0
70,754	-				-1.3
70,754	-				-1.4
70,754	-				+0.0
70,754	-				-1.3
70,754	-				-2.7
70,754	-				-0.1
70,754	-				+0.6
70,754	-				-1.0
70,754	-				-0.8
70,754	-				-0.3
70,754	-				+0.3
70,754	-				+0.8
70,754	-				+0.2
70,754	-				-0.6
70,754	-				+2.3
70,754	-				-0.7
70,759	+				-0.8
70,759	+				+0.5
70,759	+				+0.2
70,767	+				+2.1
70,767	+				+0.5
70,768	-				-0.3
70,768	-				-1.1
70,787	+				+1.8
70,788	-				-1.1
70,790	+				-0.3
70,790	+				+0.9
70,790	+				+0.2
70,790	+				+2.0
70,790	+				-2.3
70,791	-				-1.7
70,817	-				+0.0
70,821	+				+0.5
70,821	+				+2.3
70,821	+				+0.8
70,822	-				+0.3
70,822	-				-0.8
70,847	+				-0.4
70,847	+				-1.1
70,857	+				-1.0
70,878	+				-0.3
70,878	+				-0.3
70,924	+				+0.8
70,924	+				+0.2
70,924	+				-0.3
70,924	+				-0.8
70,924	+				+0.9
70,924	+				-0.4
70,924	+				+1.2
70,925	-				+2.1
70,925	-				+0.3
70,925	-				+0.2
70,925	-				-1.4
70,925	-				+1.5
70,925	-				-2.0
70,931	+				-1.4
70,931	+				+2.2
70,931	+				-0.6
70,931	+				-1.3
70,932	-				-0.0
70,932	-				-0.5
70,932	-				-0.9
70,932	-				-1.0
70,950	+				-0.5
70,968	-				-0.0
71,013	+		Sama_0065	0.11	-2.7
71,013	+		Sama_0065	0.11	-0.2
71,014	-		Sama_0065	0.11	-0.8
71,082	-		Sama_0065	0.19	+0.0
71,082	-		Sama_0065	0.19	-0.8
71,101	+		Sama_0065	0.21	+1.6
71,102	-		Sama_0065	0.21	+0.2
71,102	-		Sama_0065	0.21	-0.3
71,102	-		Sama_0065	0.21	+0.9
71,102	-		Sama_0065	0.21	+2.0
71,102	-		Sama_0065	0.21	-2.5
71,120	+		Sama_0065	0.23	-2.8
71,120	+		Sama_0065	0.23	+0.5
71,195	-		Sama_0065	0.31	+1.5
71,221	+		Sama_0065	0.34	-1.0
71,221	+		Sama_0065	0.34	-0.1
71,222	-		Sama_0065	0.34	+0.9
71,222	-		Sama_0065	0.34	-1.0
71,222	-		Sama_0065	0.34	-2.2
71,222	-		Sama_0065	0.34	-1.7
71,222	-		Sama_0065	0.34	-1.1
71,249	+		Sama_0065	0.37	+0.1
71,249	+		Sama_0065	0.37	-2.7
71,250	-		Sama_0065	0.37	-1.1
71,276	+		Sama_0065	0.40	-0.9
71,276	+		Sama_0065	0.40	+0.9
71,276	+		Sama_0065	0.40	+2.0
71,276	+		Sama_0065	0.40	-0.8
71,277	-		Sama_0065	0.40	+1.4
71,277	-		Sama_0065	0.40	+2.9
71,277	-		Sama_0065	0.40	-1.0
71,277	-		Sama_0065	0.40	-1.1
71,277	-		Sama_0065	0.40	+2.7
71,277	-		Sama_0065	0.40	+2.5
71,277	-		Sama_0065	0.40	+1.3
71,277	-		Sama_0065	0.40	-1.1
71,277	-		Sama_0065	0.40	-0.3
71,339	+		Sama_0065	0.47	+1.5
71,339	+		Sama_0065	0.47	+1.4
71,340	-		Sama_0065	0.47	+2.5
71,341	+		Sama_0065	0.47	+0.2
71,341	+		Sama_0065	0.47	+0.6
71,341	+		Sama_0065	0.47	-0.1
71,341	+		Sama_0065	0.47	+0.9
71,341	+		Sama_0065	0.47	-1.0
71,341	+		Sama_0065	0.47	+2.2
71,341	+		Sama_0065	0.47	-3.2
71,341	+		Sama_0065	0.47	+0.5
71,341	+		Sama_0065	0.47	-0.5
71,341	+		Sama_0065	0.47	-2.3
71,342	-		Sama_0065	0.47	-0.6
71,342	-		Sama_0065	0.47	-0.2
71,342	-		Sama_0065	0.47	+1.7
71,342	-		Sama_0065	0.47	+2.9
71,342	-		Sama_0065	0.47	+1.0
71,342	-		Sama_0065	0.47	-0.1
71,342	-		Sama_0065	0.47	+0.0
71,342	-		Sama_0065	0.47	-2.3
71,343	+		Sama_0065	0.47	-2.5
71,343	+		Sama_0065	0.47	+0.0
71,344	-		Sama_0065	0.47	+1.7
71,344	-		Sama_0065	0.47	-1.5
71,344	-		Sama_0065	0.47	+1.2
71,344	-		Sama_0065	0.47	-0.3
71,344	-		Sama_0065	0.47	+1.6
71,344	-		Sama_0065	0.47	-0.5
71,344	-		Sama_0065	0.47	+0.1