Strain Fitness in Shewanella oneidensis MR-1 around SO1048

Experiment: Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.002 mg/ml
1,084,663	+		SO1046	0.56	+0.1
1,084,749	+		SO1046	0.65	+0.7
1,084,749	+		SO1046	0.65	-0.2
1,084,749	+		SO1046	0.65	-0.1
1,084,757	+		SO1046	0.66	-0.1
1,084,757	-		SO1046	0.66	+0.3
1,084,765	-		SO1046	0.67	+0.7
1,084,765	-		SO1046	0.67	+1.1
1,084,769	+		SO1046	0.68	+0.0
1,084,769	+		SO1046	0.68	+0.2
1,084,792	-		SO1046	0.70	+0.6
1,084,842	-		SO1046	0.76	-0.1
1,084,873	+		SO1046	0.79	+1.5
1,084,873	+		SO1046	0.79	-0.3
1,084,927	-		SO1046	0.85	-0.5
1,084,954	+		SO1046	0.88	-1.0
1,084,954	+		SO1046	0.88	-0.0
1,084,954	+		SO1046	0.88	-0.5
1,084,954	+		SO1046	0.88	-1.2
1,084,954	+		SO1046	0.88	+0.4
1,084,954	+		SO1046	0.88	+0.0
1,084,954	+		SO1046	0.88	+0.6
1,084,962	-		SO1046	0.89	-1.0
1,084,962	-		SO1046	0.89	+0.0
1,084,969	+				-0.7
1,084,995	+				+0.2
1,085,302	+		SO1047	0.19	+0.2
1,085,304	+		SO1047	0.20	+0.1
1,085,310	-		SO1047	0.21	-0.5
1,085,314	+		SO1047	0.22	+0.3
1,085,314	+		SO1047	0.22	-0.1
1,085,322	-		SO1047	0.25	-0.5
1,085,322	-		SO1047	0.25	+0.2
1,085,322	-		SO1047	0.25	+0.5
1,085,379	+		SO1047	0.39	+0.5
1,085,379	+		SO1047	0.39	+0.8
1,085,459	+		SO1047	0.60	+0.4
1,085,467	-		SO1047	0.62	+0.3
1,085,492	+		SO1047	0.68	-0.1
1,085,494	-		SO1047	0.69	-0.2
1,085,505	-		SO1047	0.72	+0.1
1,085,505	-		SO1047	0.72	-0.8
1,085,505	-		SO1047	0.72	+1.8
1,085,515	-		SO1047	0.74	+0.2
1,085,515	-		SO1047	0.74	+1.0
1,085,539	-		SO1047	0.81	-0.4
1,085,598	+				-1.1
1,085,598	+				+0.2
1,085,598	+				+0.2
1,085,598	+				-0.4
1,085,606	-				+0.1
1,085,606	-				-0.2
1,085,606	-				+0.0
1,085,606	-				-0.8
1,085,606	-				-0.4
1,085,616	-				+0.1
1,085,628	-				+0.0
1,085,745	+		SO1048	0.18	+1.0
1,085,753	-		SO1048	0.19	+0.2
1,085,753	-		SO1048	0.19	+2.2
1,085,805	-		SO1048	0.26	-0.2
1,085,857	+		SO1048	0.33	+0.8
1,085,911	-		SO1048	0.41	+0.2
1,085,973	+		SO1048	0.49	+1.8
1,085,973	+		SO1048	0.49	-0.1
1,085,980	-		SO1048	0.50	+0.7
1,086,124	-		SO1048	0.70	+0.2
1,086,246	+		SO1048	0.86	+0.2
1,086,308	+				+0.9
1,086,308	+				+0.9
1,086,471	-				-1.3
1,086,482	+				-0.5
1,086,557	+				+0.3
1,086,647	+				+0.2
1,086,662	-				+0.6
1,086,662	-				+0.5
1,086,793	-		SO1049	0.10	+0.5
1,086,976	-		SO1049	0.48	+0.1
1,087,032	-		SO1049	0.60	+0.3
1,087,079	+		SO1049	0.70	+0.2
1,087,087	-		SO1049	0.72	+0.5
1,087,087	-		SO1049	0.72	+0.0
1,087,087	-		SO1049	0.72	+0.1
1,087,087	-		SO1049	0.72	+0.4
1,087,110	+		SO1049	0.77	+0.6
1,087,213	-				-0.2
1,087,213	-				-0.0
1,087,314	-				+0.2