Strain Fitness in Shewanella amazonensis SB2B around Sama_R0112

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
3,112,528	+				-0.3
3,112,530	+				+0.7
3,112,606	-				-0.0
3,112,631	-				-1.0
3,112,631	-				-0.1
3,112,686	-				-0.8
3,112,712	+				-0.9
3,112,712	+				+1.3
3,112,712	+				-1.5
3,112,713	-				+0.4
3,112,716	+				+0.0
3,112,716	+				+0.0
3,112,717	-				-0.5
3,112,717	-				-0.8
3,112,722	+				+1.0
3,112,731	-				+1.5
3,112,780	+				+0.5
3,112,809	-				-0.3
3,112,857	+		Sama_2600	0.15	-0.3
3,112,857	+		Sama_2600	0.15	-0.2
3,112,863	+		Sama_2600	0.16	-0.8
3,112,863	+		Sama_2600	0.16	-1.1
3,112,863	+		Sama_2600	0.16	-0.1
3,112,863	+		Sama_2600	0.16	-0.5
3,112,863	+		Sama_2600	0.16	+0.8
3,112,863	+		Sama_2600	0.16	-0.7
3,112,863	+		Sama_2600	0.16	+0.9
3,112,863	+		Sama_2600	0.16	+0.8
3,112,863	+		Sama_2600	0.16	+0.7
3,112,863	+		Sama_2600	0.16	+1.0
3,112,864	-		Sama_2600	0.16	+1.1
3,112,864	-		Sama_2600	0.16	+0.2
3,112,864	-		Sama_2600	0.16	+0.3
3,112,864	-		Sama_2600	0.16	+0.5
3,112,864	-		Sama_2600	0.16	+0.1
3,112,864	-		Sama_2600	0.16	-1.1
3,112,867	+		Sama_2600	0.16	-0.1
3,112,868	-		Sama_2600	0.16	-0.7
3,112,930	+		Sama_2600	0.24	-1.0
3,112,930	+		Sama_2600	0.24	+0.3
3,112,930	+		Sama_2600	0.24	+0.1
3,112,930	+		Sama_2600	0.24	+0.5
3,112,931	-		Sama_2600	0.24	-1.4
3,112,954	+		Sama_2600	0.26	+0.5
3,112,955	-		Sama_2600	0.27	+1.2
3,112,986	+		Sama_2600	0.30	-0.8
3,112,987	-		Sama_2600	0.30	-0.3
3,113,019	+		Sama_2600	0.34	-0.5
3,113,020	-		Sama_2600	0.34	-0.7
3,113,020	-		Sama_2600	0.34	+0.5
3,113,020	-		Sama_2600	0.34	-0.8
3,113,041	-		Sama_2600	0.37	-0.4
3,113,041	-		Sama_2600	0.37	+1.2
3,113,053	+		Sama_2600	0.38	+0.5
3,113,053	+		Sama_2600	0.38	-0.3
3,113,053	+		Sama_2600	0.38	-0.8
3,113,053	+		Sama_2600	0.38	-0.1
3,113,053	+		Sama_2600	0.38	-0.9
3,113,071	-		Sama_2600	0.40	+0.3
3,113,087	+		Sama_2600	0.42	+0.7
3,113,087	+		Sama_2600	0.42	-0.0
3,113,087	+		Sama_2600	0.42	+0.2
3,113,088	-		Sama_2600	0.42	+0.0
3,113,088	-		Sama_2600	0.42	+1.9
3,113,088	-		Sama_2600	0.42	+1.1
3,113,088	-		Sama_2600	0.42	-0.3
3,113,088	-		Sama_2600	0.42	+0.8
3,113,088	-		Sama_2600	0.42	-0.6
3,113,088	-		Sama_2600	0.42	+1.2