Strain Fitness in Shewanella amazonensis SB2B around Sama_2508

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
3,011,988	-				+0.2
3,011,988	-				+0.1
3,012,009	-				+0.6
3,012,009	-				-0.9
3,012,009	-				-2.7
3,012,009	-				+1.0
3,012,009	-				+0.6
3,012,033	+				-0.9
3,012,072	+				+0.1
3,012,072	+				+0.4
3,012,072	+				-0.3
3,012,120	+				-0.0
3,012,121	-				-0.2
3,012,131	+				-0.6
3,012,131	+				-1.0
3,012,164	-		Sama_2507	0.12	+0.4
3,012,188	-		Sama_2507	0.15	-1.4
3,012,188	-		Sama_2507	0.15	+0.8
3,012,188	-		Sama_2507	0.15	+0.3
3,012,339	+		Sama_2507	0.33	-1.7
3,012,340	-		Sama_2507	0.34	+0.2
3,012,340	-		Sama_2507	0.34	-0.6
3,012,340	-		Sama_2507	0.34	-0.3
3,012,373	+		Sama_2507	0.38	+0.4
3,012,373	+		Sama_2507	0.38	-0.9
3,012,375	+		Sama_2507	0.38	-0.1
3,012,375	+		Sama_2507	0.38	-1.6
3,012,375	+		Sama_2507	0.38	+0.3
3,012,376	-		Sama_2507	0.38	+0.0
3,012,376	-		Sama_2507	0.38	-0.9
3,012,376	-		Sama_2507	0.38	+0.2
3,012,383	-		Sama_2507	0.39	-0.6
3,012,443	+		Sama_2507	0.46	+0.1
3,012,443	+		Sama_2507	0.46	-1.9
3,012,444	-		Sama_2507	0.47	-0.6
3,012,444	-		Sama_2507	0.47	+0.7
3,012,558	+		Sama_2507	0.61	-1.7
3,012,558	+		Sama_2507	0.61	+0.2
3,012,559	-		Sama_2507	0.61	+0.7
3,012,559	-		Sama_2507	0.61	+0.4
3,012,684	+		Sama_2507	0.77	+0.7
3,012,684	+		Sama_2507	0.77	+0.1
3,012,684	+		Sama_2507	0.77	-0.5
3,012,685	-		Sama_2507	0.77	-0.3
3,012,685	-		Sama_2507	0.77	-0.9
3,012,698	-		Sama_2507	0.78	-0.7
3,012,782	+		Sama_2507	0.89	-0.9
3,012,782	+		Sama_2507	0.89	-0.7
3,012,783	-		Sama_2507	0.89	-0.9
3,012,783	-		Sama_2507	0.89	+0.1
3,012,857	-				-0.0
3,012,857	-				-1.0
3,012,875	+				+1.4
3,012,876	-				+0.4
3,012,876	-				+2.0
3,012,886	+				+0.7
3,013,080	+		Sama_2508	0.12	+0.7
3,013,142	+		Sama_2508	0.18	+0.9
3,013,192	-		Sama_2508	0.23	+0.4
3,013,257	+		Sama_2508	0.30	+0.5
3,013,258	-		Sama_2508	0.30	+1.4
3,013,258	-		Sama_2508	0.30	-0.1
3,013,417	+		Sama_2508	0.46	-0.0
3,013,417	+		Sama_2508	0.46	-0.4
3,013,417	+		Sama_2508	0.46	-0.6
3,013,417	+		Sama_2508	0.46	-0.6
3,013,417	+		Sama_2508	0.46	+0.6
3,013,418	-		Sama_2508	0.46	-0.7
3,013,418	-		Sama_2508	0.46	-2.3
3,013,418	-		Sama_2508	0.46	+1.1
3,013,418	-		Sama_2508	0.46	+1.4
3,013,425	+		Sama_2508	0.46	+0.4
3,013,426	-		Sama_2508	0.47	+0.0
3,013,464	-		Sama_2508	0.50	-0.7
3,013,519	+		Sama_2508	0.56	+0.3
3,013,520	-		Sama_2508	0.56	+0.5
3,013,673	+		Sama_2508	0.71	+0.6
3,013,673	+		Sama_2508	0.71	+1.0
3,013,673	+		Sama_2508	0.71	+0.1
3,013,673	+		Sama_2508	0.71	+0.2
3,013,674	-		Sama_2508	0.71	-0.8
3,013,731	+		Sama_2508	0.77	-0.8
3,013,731	+		Sama_2508	0.77	-0.6
3,013,731	+		Sama_2508	0.77	+0.4
3,013,731	+		Sama_2508	0.77	-0.2
3,013,732	-		Sama_2508	0.77	+0.9
3,013,732	-		Sama_2508	0.77	+0.1
3,013,732	-		Sama_2508	0.77	+0.3
3,013,732	-		Sama_2508	0.77	-0.4
3,013,732	-		Sama_2508	0.77	+0.4
3,013,732	-		Sama_2508	0.77	+0.4
3,013,732	-		Sama_2508	0.77	+0.9
3,013,772	-		Sama_2508	0.81	+0.3
3,013,772	-		Sama_2508	0.81	+0.4
3,013,772	-		Sama_2508	0.81	+0.8
3,013,774	+		Sama_2508	0.81	-0.6
3,013,775	-		Sama_2508	0.81	-0.0
3,013,775	-		Sama_2508	0.81	-0.2
3,013,775	-		Sama_2508	0.81	+0.3
3,013,775	-		Sama_2508	0.81	-1.1
3,013,775	-		Sama_2508	0.81	+0.0
3,013,775	-		Sama_2508	0.81	-1.0
3,013,819	+		Sama_2508	0.85	-0.1
3,013,820	-		Sama_2508	0.86	+0.4
3,013,820	-		Sama_2508	0.86	+0.6
3,013,842	+		Sama_2508	0.88	-0.6
3,013,849	-		Sama_2508	0.88	-0.6
3,013,892	+				-0.6
3,013,892	+				+0.4
3,013,893	-				+0.0
3,013,893	-				-0.1
3,013,893	-				-0.2
3,013,899	+				-0.1
3,013,899	+				-2.1
3,013,899	+				+1.2
3,013,900	-				-2.3
3,013,900	-				-1.1
3,013,929	+				-2.0
3,013,929	+				+0.0
3,013,930	-				-1.1
3,013,984	-				-2.7
3,014,005	-				+0.4
3,014,026	+				-0.3
3,014,026	+				-0.3
3,014,026	+				-0.3
3,014,026	+				+1.3
3,014,026	+				-0.2
3,014,027	-				-0.5
3,014,027	-				-1.3
3,014,027	-				+1.4
3,014,027	-				-0.1
3,014,027	-				+0.6
3,014,058	+				+0.8
3,014,058	+				-0.2
3,014,058	+				-0.9
3,014,058	+				+0.2
3,014,058	+				-1.0
3,014,065	-				-0.7
3,014,072	-				-0.3
3,014,072	-				+0.5
3,014,072	-				+2.0
3,014,072	-				+1.0
3,014,072	-				+0.4
3,014,072	-				-0.3
3,014,102	+				+0.2
3,014,102	+				+0.2
3,014,103	-				-1.4
3,014,103	-				-1.3
3,014,134	+		Sama_2509	0.12	+0.4
3,014,140	+		Sama_2509	0.13	+0.3
3,014,157	+		Sama_2509	0.16	+0.0
3,014,157	+		Sama_2509	0.16	+1.0
3,014,158	-		Sama_2509	0.16	+0.4
3,014,185	+		Sama_2509	0.20	+0.4
3,014,186	-		Sama_2509	0.20	+0.1
3,014,186	-		Sama_2509	0.20	+0.7
3,014,269	+		Sama_2509	0.33	+0.4
3,014,269	+		Sama_2509	0.33	-0.3
3,014,269	+		Sama_2509	0.33	-0.9
3,014,269	+		Sama_2509	0.33	+1.2
3,014,270	-		Sama_2509	0.34	+0.2
3,014,308	-		Sama_2509	0.40	+0.3
3,014,308	-		Sama_2509	0.40	+1.6
3,014,308	-		Sama_2509	0.40	+0.5
3,014,308	-		Sama_2509	0.40	-0.9
3,014,309	+		Sama_2509	0.40	-0.1
3,014,309	+		Sama_2509	0.40	-0.8
3,014,310	-		Sama_2509	0.40	+1.1
3,014,310	-		Sama_2509	0.40	-0.2
3,014,310	-		Sama_2509	0.40	+0.4
3,014,310	-		Sama_2509	0.40	+0.2
3,014,310	-		Sama_2509	0.40	-0.5
3,014,322	+		Sama_2509	0.42	+0.1
3,014,397	+		Sama_2509	0.54	+0.0
3,014,397	+		Sama_2509	0.54	+0.1
3,014,397	+		Sama_2509	0.54	+0.1
3,014,397	+		Sama_2509	0.54	+0.0
3,014,397	+		Sama_2509	0.54	+0.3
3,014,397	+		Sama_2509	0.54	-0.5
3,014,397	+		Sama_2509	0.54	+1.0
3,014,397	+		Sama_2509	0.54	-0.1
3,014,397	+		Sama_2509	0.54	-0.6
3,014,397	+		Sama_2509	0.54	-0.3
3,014,397	+		Sama_2509	0.54	+0.1
3,014,398	-		Sama_2509	0.54	+0.3
3,014,398	-		Sama_2509	0.54	-0.4
3,014,398	-		Sama_2509	0.54	-0.0
3,014,398	-		Sama_2509	0.54	-0.5
3,014,398	-		Sama_2509	0.54	-1.1
3,014,398	-		Sama_2509	0.54	+0.3
3,014,398	-		Sama_2509	0.54	-0.0
3,014,401	+		Sama_2509	0.55	+0.7
3,014,401	+		Sama_2509	0.55	+0.4
3,014,402	-		Sama_2509	0.55	-0.1
3,014,402	-		Sama_2509	0.55	+1.1
3,014,506	+		Sama_2509	0.71	+0.0
3,014,506	+		Sama_2509	0.71	-0.0
3,014,507	-		Sama_2509	0.71	+0.0
3,014,507	-		Sama_2509	0.71	-0.9
3,014,507	-		Sama_2509	0.71	+1.4
3,014,544	+		Sama_2509	0.77	-0.3
3,014,544	+		Sama_2509	0.77	-1.0
3,014,545	-		Sama_2509	0.78	+0.3
3,014,545	-		Sama_2509	0.78	-1.1
3,014,545	-		Sama_2509	0.78	+0.8
3,014,545	-		Sama_2509	0.78	-0.6
3,014,545	-		Sama_2509	0.78	+0.4
3,014,622	+		Sama_2509	0.90	-1.2
3,014,622	+		Sama_2509	0.90	-0.3
3,014,622	+		Sama_2509	0.90	+0.2
3,014,622	+		Sama_2509	0.90	-0.8
3,014,622	+		Sama_2509	0.90	+0.1
3,014,622	+		Sama_2509	0.90	-0.6
3,014,622	+		Sama_2509	0.90	+0.1
3,014,622	+		Sama_2509	0.90	-0.2
3,014,623	-				-0.6
3,014,623	-				-0.6
3,014,623	-				-0.8
3,014,623	-				+0.4
3,014,623	-				+1.5
3,014,623	-				+0.0
3,014,623	-				+0.4
3,014,623	-				-0.3
3,014,623	-				-0.6
3,014,770	-				+2.4