Strain Fitness in Shewanella amazonensis SB2B around Sama_1865

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
2,273,205	+		Sama_1864	0.64	-1.0
2,273,205	+		Sama_1864	0.64	-1.1
2,273,205	+		Sama_1864	0.64	-0.1
2,273,205	+		Sama_1864	0.64	+0.8
2,273,206	-		Sama_1864	0.64	+0.7
2,273,206	-		Sama_1864	0.64	+0.6
2,273,206	-		Sama_1864	0.64	+0.4
2,273,206	-		Sama_1864	0.64	+0.9
2,273,206	-		Sama_1864	0.64	-0.8
2,273,223	+		Sama_1864	0.64	-0.4
2,273,248	+		Sama_1864	0.66	+0.6
2,273,249	-		Sama_1864	0.66	-1.1
2,273,268	-		Sama_1864	0.66	+0.6
2,273,333	+		Sama_1864	0.69	-0.2
2,273,333	+		Sama_1864	0.69	-1.0
2,273,333	+		Sama_1864	0.69	-0.2
2,273,333	+		Sama_1864	0.69	+0.1
2,273,333	+		Sama_1864	0.69	+1.5
2,273,334	-		Sama_1864	0.69	+0.5
2,273,334	-		Sama_1864	0.69	-0.4
2,273,334	-		Sama_1864	0.69	+0.9
2,273,334	-		Sama_1864	0.69	-1.6
2,273,334	-		Sama_1864	0.69	+0.4
2,273,334	-		Sama_1864	0.69	-0.4
2,273,334	-		Sama_1864	0.69	-0.9
2,273,335	+		Sama_1864	0.69	+1.8
2,273,335	+		Sama_1864	0.69	+0.6
2,273,335	+		Sama_1864	0.69	+1.7
2,273,335	+		Sama_1864	0.69	-0.8
2,273,336	-		Sama_1864	0.69	-1.8
2,273,336	-		Sama_1864	0.69	+0.7
2,273,336	-		Sama_1864	0.69	+0.5
2,273,336	-		Sama_1864	0.69	-0.7
2,273,336	-		Sama_1864	0.69	+0.0
2,273,620	+		Sama_1864	0.82	-1.4
2,273,775	+		Sama_1864	0.89	-0.3
2,273,953	+				-0.4
2,273,953	+				-0.3
2,273,954	-				+0.5
2,274,020	+				+1.3
2,274,020	+				-0.8
2,274,021	-				-0.8
2,274,021	-				+0.2
2,274,021	-				-0.1
2,274,021	-				-0.0
2,274,021	-				+1.5
2,274,021	-				+1.6
2,274,021	-				-0.3
2,274,021	-				-2.1
2,274,183	+				-0.8
2,274,183	+				+0.5
2,274,183	+				+0.7
2,274,184	-				-1.0
2,274,184	-				-0.5
2,274,184	-				-0.8
2,274,184	-				-0.0
2,274,184	-				-0.1
2,274,184	-				+0.5
2,274,184	-				+0.8
2,274,184	-				-0.6
2,274,184	-				-0.1
2,274,250	+				+1.1
2,274,254	+				+1.1
2,274,254	+				-0.6
2,274,255	-				-0.2
2,274,255	-				-0.8
2,274,255	-				-0.8
2,274,418	-		Sama_1865	0.31	+1.8
2,274,478	+		Sama_1865	0.40	+0.2
2,274,535	+		Sama_1865	0.48	+0.2
2,274,535	+		Sama_1865	0.48	-0.1
2,274,536	-		Sama_1865	0.48	+0.7
2,274,536	-		Sama_1865	0.48	-0.8
2,274,610	+		Sama_1865	0.59	+0.2
2,274,610	+		Sama_1865	0.59	-0.4
2,274,611	-		Sama_1865	0.59	-2.6
2,274,611	-		Sama_1865	0.59	+0.9
2,274,611	-		Sama_1865	0.59	-0.3
2,274,611	-		Sama_1865	0.59	-0.7
2,274,611	-		Sama_1865	0.59	+0.3
2,274,611	-		Sama_1865	0.59	+1.2
2,274,611	-		Sama_1865	0.59	-0.8
2,274,614	+		Sama_1865	0.60	+0.2
2,274,615	-		Sama_1865	0.60	+0.6
2,274,677	-		Sama_1865	0.69	-0.0
2,274,677	-		Sama_1865	0.69	-2.6
2,274,677	-		Sama_1865	0.69	-0.7
2,274,678	+		Sama_1865	0.69	+0.2
2,274,678	+		Sama_1865	0.69	+0.2
2,274,678	+		Sama_1865	0.69	+0.5
2,274,679	-		Sama_1865	0.69	+0.8
2,274,679	-		Sama_1865	0.69	-1.1
2,274,679	-		Sama_1865	0.69	+0.8
2,274,679	-		Sama_1865	0.69	+0.9
2,274,679	-		Sama_1865	0.69	+1.2
2,274,846	+				+1.5
2,275,013	-				+1.8
2,275,013	-				+1.6
2,275,015	-				+2.1
2,275,035	-				+2.0
2,275,035	-				+0.9
2,275,246	-		Sama_1866	0.14	+2.3
2,275,322	+		Sama_1866	0.19	+1.9
2,275,322	+		Sama_1866	0.19	+0.8
2,275,365	+		Sama_1866	0.22	+1.4
2,275,365	+		Sama_1866	0.22	+0.6
2,275,365	+		Sama_1866	0.22	+0.8
2,275,366	-		Sama_1866	0.22	+1.2
2,275,366	-		Sama_1866	0.22	+1.9
2,275,366	-		Sama_1866	0.22	+1.0
2,275,378	-		Sama_1866	0.23	+1.2
2,275,378	-		Sama_1866	0.23	+1.5
2,275,378	-		Sama_1866	0.23	+1.6
2,275,378	-		Sama_1866	0.23	+1.5
2,275,378	-		Sama_1866	0.23	+1.6
2,275,451	+		Sama_1866	0.28	+2.1
2,275,451	+		Sama_1866	0.28	+1.9
2,275,451	+		Sama_1866	0.28	+1.2
2,275,451	+		Sama_1866	0.28	+1.9
2,275,451	+		Sama_1866	0.28	+1.1
2,275,452	-		Sama_1866	0.28	+1.6
2,275,452	-		Sama_1866	0.28	+2.3
2,275,452	-		Sama_1866	0.28	+1.5
2,275,452	-		Sama_1866	0.28	+1.3
2,275,452	-		Sama_1866	0.28	+1.5
2,275,452	-		Sama_1866	0.28	+1.7
2,275,488	+		Sama_1866	0.31	+1.9
2,275,488	+		Sama_1866	0.31	+1.9
2,275,523	-		Sama_1866	0.33	+2.5
2,275,523	-		Sama_1866	0.33	+2.6
2,275,556	+		Sama_1866	0.36	+1.0
2,275,556	+		Sama_1866	0.36	+0.7
2,275,556	+		Sama_1866	0.36	+1.8
2,275,566	-		Sama_1866	0.36	+2.0
2,275,594	+		Sama_1866	0.38	+1.2
2,275,594	+		Sama_1866	0.38	-0.2
2,275,594	+		Sama_1866	0.38	+1.6
2,275,595	-		Sama_1866	0.38	+1.1
2,275,595	-		Sama_1866	0.38	+1.6
2,275,595	-		Sama_1866	0.38	+0.9
2,275,651	-		Sama_1866	0.42	+0.8