Strain Fitness in Shewanella amazonensis SB2B around Sama_1737
Experiment: Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,127,912 | + | +1.0 | |||
2,127,915 | + | +0.5 | |||
2,127,921 | + | -0.6 | |||
2,127,921 | + | -0.2 | |||
2,127,925 | + | +0.2 | |||
2,127,993 | + | ihfB | Sama_1737 | 0.22 | -1.8 |
2,128,033 | + | ihfB | Sama_1737 | 0.36 | -1.7 |
2,128,091 | + | ihfB | Sama_1737 | 0.56 | -0.5 |
2,128,154 | + | ihfB | Sama_1737 | 0.78 | -0.4 |
2,128,521 | + | Sama_1738 | 0.65 | +1.2 |
Or see this region's nucleotide sequence