Strain Fitness in Shewanella amazonensis SB2B around Sama_1649

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
2,013,513	-				+0.2
2,013,513	-				-0.3
2,013,537	-		Sama_1648	0.14	-0.4
2,013,620	-		Sama_1648	0.38	+0.2
2,013,886	-				+0.2
2,013,886	-				-1.0
2,013,939	-				+1.0
2,013,988	+		Sama_1649	0.13	-1.8
2,014,196	+		Sama_1649	0.53	-0.2
2,014,230	+		Sama_1649	0.60	-1.4
2,014,231	-		Sama_1649	0.60	-1.1
2,014,454	-				+0.2
2,014,490	-				+0.8
2,014,507	-				-1.6
2,014,510	+				-0.2
2,014,510	+				-0.6
2,014,511	-				+0.2
2,014,511	-				+0.2
2,014,512	+				+0.2
2,014,513	-				+0.2
2,014,516	+				+0.1
2,014,517	-				+0.4
2,014,521	-				-0.5
2,014,521	-				-0.2
2,014,521	-				-0.6
2,014,523	-				+0.9
2,014,523	-				+0.4
2,014,523	-				+0.3
2,014,523	-				+0.4
2,014,670	+				-0.8
2,014,670	+				-0.1
2,014,671	-				+0.1
2,014,719	-		Sama_1650	0.13	+1.0
2,014,763	+		Sama_1650	0.15	-1.1
2,014,840	-		Sama_1650	0.20	+0.4
2,014,887	-		Sama_1650	0.22	+0.1
2,014,887	-		Sama_1650	0.22	+0.7
2,014,931	+		Sama_1650	0.25	+0.2
2,015,033	-		Sama_1650	0.31	+0.4
2,015,033	-		Sama_1650	0.31	+1.0
2,015,090	+		Sama_1650	0.34	+0.2
2,015,091	-		Sama_1650	0.34	+0.8
2,015,091	-		Sama_1650	0.34	+0.1
2,015,125	+		Sama_1650	0.36	+0.4
2,015,126	-		Sama_1650	0.36	+1.8
2,015,126	-		Sama_1650	0.36	+1.1
2,015,206	+		Sama_1650	0.41	-0.1
2,015,207	-		Sama_1650	0.41	-0.0
2,015,215	+		Sama_1650	0.42	-1.5
2,015,215	+		Sama_1650	0.42	-0.0
2,015,216	-		Sama_1650	0.42	+0.3
2,015,216	-		Sama_1650	0.42	+2.1
2,015,216	-		Sama_1650	0.42	-0.4
2,015,216	-		Sama_1650	0.42	-0.1
2,015,216	-		Sama_1650	0.42	-0.4
2,015,216	-		Sama_1650	0.42	+0.6
2,015,219	+		Sama_1650	0.42	+0.9
2,015,219	+		Sama_1650	0.42	+0.3
2,015,219	+		Sama_1650	0.42	+0.2
2,015,219	+		Sama_1650	0.42	-1.1
2,015,220	-		Sama_1650	0.42	+0.5
2,015,220	-		Sama_1650	0.42	+0.8
2,015,263	-		Sama_1650	0.44	-0.6
2,015,272	-		Sama_1650	0.45	-0.8
2,015,314	+		Sama_1650	0.47	+0.3
2,015,314	+		Sama_1650	0.47	+0.8
2,015,314	+		Sama_1650	0.47	+0.5
2,015,315	-		Sama_1650	0.48	-1.6
2,015,369	+		Sama_1650	0.51	+0.4
2,015,369	+		Sama_1650	0.51	-0.4
2,015,369	+		Sama_1650	0.51	+1.4
2,015,370	-		Sama_1650	0.51	-0.2
2,015,370	-		Sama_1650	0.51	+0.4
2,015,370	-		Sama_1650	0.51	-0.5
2,015,405	+		Sama_1650	0.53	+0.8
2,015,405	+		Sama_1650	0.53	-1.0
2,015,405	+		Sama_1650	0.53	-0.5
2,015,405	+		Sama_1650	0.53	-0.3
2,015,405	+		Sama_1650	0.53	-0.7
2,015,406	-		Sama_1650	0.53	+1.2
2,015,406	-		Sama_1650	0.53	+0.1