Strain Fitness in Shewanella amazonensis SB2B around Sama_1584

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
1,926,499	+		Sama_1582	0.19	+0.2
1,926,499	+		Sama_1582	0.19	-0.6
1,926,499	+		Sama_1582	0.19	+0.6
1,926,500	-		Sama_1582	0.20	-0.8
1,926,524	+		Sama_1582	0.28	+0.0
1,926,541	+		Sama_1582	0.34	+0.2
1,926,566	-		Sama_1582	0.43	+0.5
1,926,620	+		Sama_1582	0.61	-0.4
1,926,620	+		Sama_1582	0.61	-0.8
1,926,620	+		Sama_1582	0.61	+0.2
1,926,620	+		Sama_1582	0.61	+0.2
1,926,621	-		Sama_1582	0.62	-1.0
1,926,621	-		Sama_1582	0.62	-0.1
1,926,621	-		Sama_1582	0.62	-0.9
1,926,645	+		Sama_1582	0.70	-1.2
1,926,764	+				+0.6
1,926,774	+				+0.8
1,926,774	+				+0.7
1,926,887	+		Sama_1583	0.30	-1.3
1,926,887	+		Sama_1583	0.30	+0.5
1,926,887	+		Sama_1583	0.30	-1.1
1,926,887	+		Sama_1583	0.30	+1.4
1,926,887	+		Sama_1583	0.30	+0.6
1,926,887	+		Sama_1583	0.30	+0.6
1,926,970	-		Sama_1583	0.48	-1.6
1,926,994	+		Sama_1583	0.53	-0.2
1,926,994	+		Sama_1583	0.53	+1.0
1,926,994	+		Sama_1583	0.53	-1.2
1,926,994	+		Sama_1583	0.53	+0.4
1,926,995	-		Sama_1583	0.53	+0.2
1,927,036	+		Sama_1583	0.62	+1.6
1,927,036	+		Sama_1583	0.62	+0.4
1,927,058	-		Sama_1583	0.67	+0.0
1,927,098	+		Sama_1583	0.76	-0.8
1,927,099	-		Sama_1583	0.76	-0.1
1,927,208	+				-0.3
1,927,258	+				+0.0
1,927,260	+				-2.1
1,927,260	+				+0.5
1,927,260	+				-1.8
1,927,263	+				-0.7
1,927,263	+				-0.4
1,927,263	+				-0.2
1,927,263	+				-0.8
1,927,263	+				-0.8
1,927,263	+				+0.9
1,927,263	+				-1.3
1,927,263	+				-1.6
1,927,263	+				+0.4
1,927,263	+				+0.4
1,927,324	+				-2.1
1,927,324	+				+0.9
1,927,331	+				-0.4
1,927,360	+				-1.4
1,927,360	+				-2.3
1,927,444	+				+1.7
1,927,853	+		Sama_1584	0.59	-2.7
1,928,068	+				+0.8
1,928,068	+				-0.6
1,928,068	+				-0.2
1,928,068	+				-1.1
1,928,068	+				-0.8
1,928,109	+				+0.4
1,928,111	+				-0.7
1,928,111	+				-1.2
1,928,111	+				+1.2
1,928,113	+				-3.7
1,928,113	+				+0.2
1,928,318	+				-2.2
1,928,374	+		Sama_1585	0.11	-3.5
1,928,474	-		Sama_1585	0.16	-0.8
1,928,486	+		Sama_1585	0.16	-2.7
1,928,534	+		Sama_1585	0.19	-2.3
1,928,550	+		Sama_1585	0.19	-1.8
1,928,551	-		Sama_1585	0.19	-0.8
1,928,588	+		Sama_1585	0.21	-2.6
1,928,588	+		Sama_1585	0.21	-1.8
1,928,666	+		Sama_1585	0.25	-2.1
1,928,666	+		Sama_1585	0.25	-1.6
1,928,666	+		Sama_1585	0.25	-2.3
1,928,666	+		Sama_1585	0.25	-2.3
1,928,781	+		Sama_1585	0.31	-2.3
1,928,834	+		Sama_1585	0.33	-2.1
1,928,834	+		Sama_1585	0.33	-1.1
1,928,834	+		Sama_1585	0.33	-2.1
1,928,834	+		Sama_1585	0.33	-1.8
1,929,000	+		Sama_1585	0.41	+0.2
1,929,000	+		Sama_1585	0.41	-3.1
1,929,000	+		Sama_1585	0.41	-3.9
1,929,000	+		Sama_1585	0.41	-0.9
1,929,000	+		Sama_1585	0.41	-1.8
1,929,000	+		Sama_1585	0.41	-0.8
1,929,006	+		Sama_1585	0.42	-2.3
1,929,006	+		Sama_1585	0.42	-1.8
1,929,006	+		Sama_1585	0.42	-1.9
1,929,061	-		Sama_1585	0.44	-3.5
1,929,070	+		Sama_1585	0.45	-1.3