Strain Fitness in Shewanella amazonensis SB2B around Sama_1064

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
1,288,157	+				+1.3
1,288,222	+		Sama_1063	0.14	+0.6
1,288,308	+		Sama_1063	0.22	-0.5
1,288,308	+		Sama_1063	0.22	-0.9
1,288,309	-		Sama_1063	0.22	-1.9
1,288,309	-		Sama_1063	0.22	-0.3
1,288,353	+		Sama_1063	0.27	-0.7
1,288,354	-		Sama_1063	0.27	+1.3
1,288,370	+		Sama_1063	0.28	-0.7
1,288,371	-		Sama_1063	0.28	-0.7
1,288,403	+		Sama_1063	0.31	-0.8
1,288,403	+		Sama_1063	0.31	-0.9
1,288,403	+		Sama_1063	0.31	+0.2
1,288,404	-		Sama_1063	0.31	+0.7
1,288,404	-		Sama_1063	0.31	-0.5
1,288,404	-		Sama_1063	0.31	-0.1
1,288,404	-		Sama_1063	0.31	+0.6
1,288,480	+		Sama_1063	0.38	-0.0
1,288,480	+		Sama_1063	0.38	+1.3
1,288,480	+		Sama_1063	0.38	+0.3
1,288,480	+		Sama_1063	0.38	-0.6
1,288,480	+		Sama_1063	0.38	-0.1
1,288,480	+		Sama_1063	0.38	+0.3
1,288,480	+		Sama_1063	0.38	+0.7
1,288,481	-		Sama_1063	0.38	-0.9
1,288,481	-		Sama_1063	0.38	-0.0
1,288,481	-		Sama_1063	0.38	+1.1
1,288,481	-		Sama_1063	0.38	+0.2
1,288,481	-		Sama_1063	0.38	+0.5
1,288,481	-		Sama_1063	0.38	-1.9
1,288,484	+		Sama_1063	0.39	-0.4
1,288,484	+		Sama_1063	0.39	-1.3
1,288,484	+		Sama_1063	0.39	-0.0
1,288,484	+		Sama_1063	0.39	-0.2
1,288,484	+		Sama_1063	0.39	+0.9
1,288,485	-		Sama_1063	0.39	-0.3
1,288,485	-		Sama_1063	0.39	-0.8
1,288,485	-		Sama_1063	0.39	+0.7
1,288,485	-		Sama_1063	0.39	-0.1
1,288,485	-		Sama_1063	0.39	+0.5
1,288,485	-		Sama_1063	0.39	+0.7
1,288,485	-		Sama_1063	0.39	-1.0
1,288,798	+		Sama_1063	0.67	+0.1
1,288,798	+		Sama_1063	0.67	-0.4
1,288,798	+		Sama_1063	0.67	-0.4
1,288,808	-		Sama_1063	0.68	+0.6
1,288,808	-		Sama_1063	0.68	-1.5
1,288,865	+		Sama_1063	0.74	+0.4
1,288,865	+		Sama_1063	0.74	-0.5
1,288,866	-		Sama_1063	0.74	+0.3
1,288,866	-		Sama_1063	0.74	+0.6
1,288,866	-		Sama_1063	0.74	-0.3
1,288,866	-		Sama_1063	0.74	-2.1
1,288,894	+		Sama_1063	0.76	+0.9
1,289,049	-				-0.4
1,289,049	-				-0.5
1,289,099	+				-2.5
1,289,100	-				+1.3
1,289,100	-				-0.4
1,289,100	-				+0.4
1,289,124	+				+0.5
1,289,125	-				+0.7
1,289,154	+				+0.8
1,289,154	+				+0.4
1,289,154	+				+0.5
1,289,154	+				+1.1
1,289,155	-				-1.3
1,289,508	-		Sama_1064	0.72	-1.3
1,289,550	+		Sama_1064	0.81	-1.3
1,289,567	-		Sama_1064	0.84	-0.4
1,289,622	-				-1.3
1,289,647	+				+0.5
1,289,674	+				+0.5
1,289,675	-				+0.8
1,289,698	+				+0.1
1,289,733	+				-0.3
1,289,766	+				-2.7
1,289,766	+				-0.9
1,289,766	+				-0.9
1,289,766	+				-0.1
1,289,766	+				-0.8
1,289,767	-				-0.4
1,289,775	-				+0.2
1,289,828	+				+1.0
1,289,828	+				-0.3
1,289,828	+				-0.1
1,289,829	-				-0.4
1,289,829	-				+0.1
1,289,830	+				+0.7
1,289,934	+		Sama_1065	0.12	+0.4
1,289,934	+		Sama_1065	0.12	-3.0
1,289,934	+		Sama_1065	0.12	+0.7
1,289,935	-		Sama_1065	0.12	-0.8
1,289,962	+		Sama_1065	0.15	+0.8
1,289,981	+		Sama_1065	0.16	-0.2
1,290,065	-		Sama_1065	0.24	-0.9
1,290,065	-		Sama_1065	0.24	-0.2
1,290,091	+		Sama_1065	0.26	-0.4
1,290,091	+		Sama_1065	0.26	-0.6
1,290,092	-		Sama_1065	0.26	+0.1
1,290,092	-		Sama_1065	0.26	+0.0
1,290,092	-		Sama_1065	0.26	-0.5
1,290,093	+		Sama_1065	0.26	+0.6
1,290,148	+		Sama_1065	0.31	+1.2
1,290,148	+		Sama_1065	0.31	+0.5
1,290,149	-		Sama_1065	0.31	+0.2
1,290,208	+		Sama_1065	0.36	-0.5
1,290,208	+		Sama_1065	0.36	+1.5
1,290,209	-		Sama_1065	0.36	+0.9
1,290,266	+		Sama_1065	0.41	-0.9
1,290,266	+		Sama_1065	0.41	-0.0
1,290,281	+		Sama_1065	0.42	-0.3
1,290,282	-		Sama_1065	0.43	+0.1
1,290,282	-		Sama_1065	0.43	-2.7
1,290,347	+		Sama_1065	0.48	+0.0
1,290,347	+		Sama_1065	0.48	+0.9
1,290,347	+		Sama_1065	0.48	-0.3
1,290,347	+		Sama_1065	0.48	-0.1
1,290,347	+		Sama_1065	0.48	+0.1
1,290,347	+		Sama_1065	0.48	+0.6
1,290,348	-		Sama_1065	0.48	+0.1
1,290,348	-		Sama_1065	0.48	-0.4
1,290,348	-		Sama_1065	0.48	+0.5
1,290,348	-		Sama_1065	0.48	+0.5
1,290,351	+		Sama_1065	0.49	-0.2
1,290,352	-		Sama_1065	0.49	-0.2
1,290,352	-		Sama_1065	0.49	+1.1
1,290,352	-		Sama_1065	0.49	+0.5
1,290,352	-		Sama_1065	0.49	-0.2
1,290,413	-		Sama_1065	0.54	-0.8
1,290,438	-		Sama_1065	0.56	-1.0
1,290,438	-		Sama_1065	0.56	+0.0
1,290,460	+		Sama_1065	0.58	+0.6
1,290,460	+		Sama_1065	0.58	-1.2
1,290,461	-		Sama_1065	0.58	-0.0
1,290,461	-		Sama_1065	0.58	-0.8
1,290,461	-		Sama_1065	0.58	+1.1
1,290,461	-		Sama_1065	0.58	+0.7
1,290,490	+		Sama_1065	0.61	-2.7
1,290,490	+		Sama_1065	0.61	+1.2
1,290,491	-		Sama_1065	0.61	-0.3
1,290,491	-		Sama_1065	0.61	+1.4
1,290,508	-		Sama_1065	0.62	-0.2
1,290,529	+		Sama_1065	0.64	-0.0
1,290,529	+		Sama_1065	0.64	-1.9
1,290,581	-		Sama_1065	0.69	-0.4
1,290,588	-		Sama_1065	0.69	+0.6
1,290,602	+		Sama_1065	0.71	-0.0
1,290,604	+		Sama_1065	0.71	+0.7
1,290,604	+		Sama_1065	0.71	-0.3
1,290,604	+		Sama_1065	0.71	+0.2
1,290,604	+		Sama_1065	0.71	-0.2
1,290,604	+		Sama_1065	0.71	+0.1
1,290,604	+		Sama_1065	0.71	-0.9
1,290,604	+		Sama_1065	0.71	-0.2
1,290,604	+		Sama_1065	0.71	+0.3
1,290,605	-		Sama_1065	0.71	-0.5
1,290,605	-		Sama_1065	0.71	+1.1
1,290,605	-		Sama_1065	0.71	-0.5
1,290,605	-		Sama_1065	0.71	+0.2
1,290,605	-		Sama_1065	0.71	-0.9
1,290,623	-		Sama_1065	0.72	+0.5