Strain Fitness in Shewanella amazonensis SB2B around Sama_0846

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
1,028,767	+				+0.4
1,028,791	-				-0.1
1,028,791	-				+0.0
1,028,791	-				-0.1
1,028,839	+		Sama_0844	0.11	-1.0
1,028,839	+		Sama_0844	0.11	+0.2
1,028,840	-		Sama_0844	0.11	+0.7
1,028,851	-		Sama_0844	0.13	+1.0
1,028,855	-		Sama_0844	0.14	+0.4
1,028,855	-		Sama_0844	0.14	+1.0
1,028,855	-		Sama_0844	0.14	+0.7
1,028,906	+		Sama_0844	0.26	+0.3
1,028,907	-		Sama_0844	0.27	-0.7
1,028,907	-		Sama_0844	0.27	-0.8
1,028,907	-		Sama_0844	0.27	-0.9
1,028,907	-		Sama_0844	0.27	+1.0
1,029,027	-		Sama_0844	0.55	-2.0
1,029,147	+		Sama_0844	0.83	+1.1
1,029,148	-		Sama_0844	0.84	-0.6
1,029,149	+		Sama_0844	0.84	+0.7
1,029,149	+		Sama_0844	0.84	+0.2
1,029,150	-		Sama_0844	0.84	+0.5
1,029,150	-		Sama_0844	0.84	-1.4
1,029,150	-		Sama_0844	0.84	+1.1
1,029,166	+		Sama_0844	0.88	-1.0
1,029,200	-				-0.5
1,029,228	-				-0.1
1,029,482	+		Sama_0845	0.56	+1.7
1,029,483	-		Sama_0845	0.56	-2.2
1,029,483	-		Sama_0845	0.56	-0.3
1,029,529	+		Sama_0845	0.66	+0.0
1,029,546	+		Sama_0845	0.70	-0.7
1,029,546	+		Sama_0845	0.70	-1.0
1,029,547	-		Sama_0845	0.70	-0.8
1,029,608	+		Sama_0845	0.83	+0.2
1,029,631	+		Sama_0845	0.89	+1.6
1,029,631	+		Sama_0845	0.89	-0.0
1,029,669	+				+0.5
1,029,670	-				-0.4
1,029,744	+				-0.2
1,029,744	+				-0.0
1,029,744	+				+0.4
1,029,745	-				+0.5
1,029,852	+				-1.1
1,029,853	-				+0.6
1,029,853	-				-0.1
1,029,942	+				-0.1
1,029,942	+				+1.8
1,029,942	+				+0.6
1,029,943	-				-1.1
1,029,977	-				-0.0
1,029,995	+				+0.1
1,029,996	-		Sama_0846	0.10	-0.1
1,030,033	-		Sama_0846	0.11	+0.0
1,030,054	-		Sama_0846	0.12	+0.9
1,030,054	-		Sama_0846	0.12	+0.6
1,030,099	+		Sama_0846	0.14	-1.4
1,030,099	+		Sama_0846	0.14	+0.0
1,030,099	+		Sama_0846	0.14	+0.7
1,030,100	-		Sama_0846	0.14	+0.2
1,030,100	-		Sama_0846	0.14	+0.6
1,030,101	+		Sama_0846	0.14	+0.0
1,030,101	+		Sama_0846	0.14	+0.1
1,030,101	+		Sama_0846	0.14	-0.9
1,030,102	-		Sama_0846	0.14	+0.0
1,030,165	+		Sama_0846	0.17	-1.0
1,030,165	+		Sama_0846	0.17	+0.2
1,030,165	+		Sama_0846	0.17	-0.1
1,030,166	-		Sama_0846	0.17	-0.1
1,030,166	-		Sama_0846	0.17	+0.6
1,030,176	+		Sama_0846	0.17	-1.0
1,030,176	+		Sama_0846	0.17	+0.4
1,030,176	+		Sama_0846	0.17	-1.7
1,030,177	-		Sama_0846	0.17	+0.6
1,030,280	-		Sama_0846	0.21	-1.2
1,030,297	+		Sama_0846	0.22	-0.2
1,030,352	+		Sama_0846	0.24	+1.8
1,030,353	-		Sama_0846	0.24	-0.8
1,030,389	+		Sama_0846	0.26	+0.3
1,030,403	-		Sama_0846	0.26	+0.7
1,030,435	+		Sama_0846	0.27	+0.6
1,030,435	+		Sama_0846	0.27	+1.3
1,030,435	+		Sama_0846	0.27	-1.2
1,030,435	+		Sama_0846	0.27	-0.6
1,030,435	+		Sama_0846	0.27	+0.4
1,030,435	+		Sama_0846	0.27	-0.4
1,030,435	+		Sama_0846	0.27	+0.1
1,030,435	+		Sama_0846	0.27	+0.6
1,030,436	-		Sama_0846	0.27	-0.5
1,030,436	-		Sama_0846	0.27	-0.3
1,030,436	-		Sama_0846	0.27	-0.8
1,030,437	+		Sama_0846	0.27	+0.5
1,030,437	+		Sama_0846	0.27	-1.1
1,030,437	+		Sama_0846	0.27	-0.5
1,030,438	-		Sama_0846	0.28	+0.2
1,030,438	-		Sama_0846	0.28	+0.4
1,030,449	+		Sama_0846	0.28	-0.1
1,030,492	-		Sama_0846	0.30	-0.2
1,030,506	+		Sama_0846	0.30	-1.2
1,030,506	+		Sama_0846	0.30	-0.0
1,030,506	+		Sama_0846	0.30	+0.9
1,030,507	-		Sama_0846	0.30	-0.1
1,030,507	-		Sama_0846	0.30	+0.6
1,030,552	+		Sama_0846	0.32	+0.0
1,030,552	+		Sama_0846	0.32	+1.3
1,030,553	-		Sama_0846	0.32	+0.5
1,030,553	-		Sama_0846	0.32	-1.4
1,030,553	-		Sama_0846	0.32	-1.2
1,030,565	+		Sama_0846	0.33	-0.3
1,030,565	+		Sama_0846	0.33	-0.0
1,030,565	+		Sama_0846	0.33	-0.5
1,030,601	+		Sama_0846	0.34	-0.4
1,030,619	-		Sama_0846	0.35	+0.0
1,030,774	+		Sama_0846	0.41	+0.6
1,030,798	+		Sama_0846	0.42	-0.3
1,030,798	+		Sama_0846	0.42	+0.8
1,030,799	-		Sama_0846	0.42	-0.2
1,030,799	-		Sama_0846	0.42	+0.5
1,030,825	-		Sama_0846	0.43	+0.4
1,030,825	-		Sama_0846	0.43	+0.5
1,030,830	+		Sama_0846	0.43	+0.3
1,030,830	+		Sama_0846	0.43	-1.0
1,030,830	+		Sama_0846	0.43	+0.6
1,030,830	+		Sama_0846	0.43	+0.3
1,030,830	+		Sama_0846	0.43	+3.2
1,030,830	+		Sama_0846	0.43	-2.8
1,030,830	+		Sama_0846	0.43	+0.1
1,030,830	+		Sama_0846	0.43	+0.3
1,030,830	+		Sama_0846	0.43	+0.0
1,030,830	+		Sama_0846	0.43	+0.6
1,030,830	+		Sama_0846	0.43	-0.6
1,030,830	+		Sama_0846	0.43	-0.1
1,030,830	+		Sama_0846	0.43	+0.6
1,030,830	+		Sama_0846	0.43	-0.1
1,030,830	+		Sama_0846	0.43	-0.7
1,030,831	-		Sama_0846	0.43	-0.1
1,030,831	-		Sama_0846	0.43	-2.0
1,030,831	-		Sama_0846	0.43	-0.3
1,030,831	-		Sama_0846	0.43	-0.0
1,030,831	-		Sama_0846	0.43	+0.6
1,030,831	-		Sama_0846	0.43	-0.1
1,030,831	-		Sama_0846	0.43	+0.6
1,030,831	-		Sama_0846	0.43	-0.4
1,030,831	-		Sama_0846	0.43	+0.0
1,030,831	-		Sama_0846	0.43	+0.6
1,030,831	-		Sama_0846	0.43	-0.3
1,030,831	-		Sama_0846	0.43	+0.6
1,030,877	+		Sama_0846	0.45	+0.7
1,030,877	+		Sama_0846	0.45	-1.4
1,030,877	+		Sama_0846	0.45	+1.1
1,030,878	-		Sama_0846	0.45	+0.3
1,030,878	-		Sama_0846	0.45	-0.4
1,030,900	-		Sama_0846	0.46	+1.1
1,030,903	+		Sama_0846	0.46	-0.7
1,030,903	+		Sama_0846	0.46	+1.0
1,030,903	+		Sama_0846	0.46	-0.2
1,030,904	-		Sama_0846	0.46	-0.1
1,030,904	-		Sama_0846	0.46	-0.6
1,030,916	+		Sama_0846	0.46	-0.9
1,030,916	+		Sama_0846	0.46	+0.9
1,030,916	+		Sama_0846	0.46	+0.5
1,030,916	+		Sama_0846	0.46	-0.5
1,030,924	-		Sama_0846	0.47	+0.6
1,030,967	+		Sama_0846	0.48	+0.4
1,030,968	-		Sama_0846	0.48	-0.2
1,030,985	-		Sama_0846	0.49	+0.8
1,030,985	-		Sama_0846	0.49	+1.4
1,031,012	+		Sama_0846	0.50	+0.1
1,031,012	+		Sama_0846	0.50	+0.7
1,031,013	-		Sama_0846	0.50	-0.3
1,031,013	-		Sama_0846	0.50	-0.6
1,031,076	-		Sama_0846	0.53	-0.3
1,031,092	+		Sama_0846	0.53	-1.0
1,031,092	+		Sama_0846	0.53	+0.2
1,031,093	-		Sama_0846	0.53	+0.6
1,031,093	-		Sama_0846	0.53	-0.7
1,031,093	-		Sama_0846	0.53	-1.5
1,031,112	+		Sama_0846	0.54	-0.7
1,031,112	+		Sama_0846	0.54	-0.1
1,031,112	+		Sama_0846	0.54	-1.0
1,031,112	+		Sama_0846	0.54	-0.4
1,031,112	+		Sama_0846	0.54	+0.9
1,031,113	-		Sama_0846	0.54	-0.7
1,031,113	-		Sama_0846	0.54	-1.0
1,031,113	-		Sama_0846	0.54	-1.5
1,031,165	+		Sama_0846	0.56	+0.5
1,031,165	+		Sama_0846	0.56	+2.6
1,031,166	-		Sama_0846	0.56	-1.2
1,031,166	-		Sama_0846	0.56	+1.1
1,031,166	-		Sama_0846	0.56	+0.2
1,031,166	-		Sama_0846	0.56	-0.4
1,031,296	+		Sama_0846	0.61	-0.7
1,031,297	-		Sama_0846	0.62	+0.4
1,031,297	-		Sama_0846	0.62	+0.5
1,031,297	-		Sama_0846	0.62	+0.5
1,031,371	+		Sama_0846	0.64	-0.8
1,031,371	+		Sama_0846	0.64	+0.0
1,031,371	+		Sama_0846	0.64	-1.0
1,031,371	+		Sama_0846	0.64	+0.7
1,031,372	-		Sama_0846	0.64	+0.6
1,031,372	-		Sama_0846	0.64	+0.4
1,031,444	+		Sama_0846	0.67	-0.2
1,031,444	+		Sama_0846	0.67	+0.4
1,031,444	+		Sama_0846	0.67	-0.6
1,031,444	+		Sama_0846	0.67	-0.7
1,031,445	-		Sama_0846	0.67	+0.6
1,031,445	-		Sama_0846	0.67	+0.3
1,031,446	+		Sama_0846	0.67	-1.2
1,031,446	+		Sama_0846	0.67	+0.3
1,031,447	-		Sama_0846	0.67	-0.3
1,031,447	-		Sama_0846	0.67	+0.3
1,031,447	-		Sama_0846	0.67	-0.1
1,031,447	-		Sama_0846	0.67	-0.3
1,031,447	-		Sama_0846	0.67	-1.2
1,031,447	-		Sama_0846	0.67	-0.7
1,031,521	+		Sama_0846	0.70	-0.2
1,031,522	-		Sama_0846	0.70	+0.3
1,031,528	+		Sama_0846	0.71	-0.5
1,031,528	+		Sama_0846	0.71	+0.2
1,031,528	+		Sama_0846	0.71	-0.3
1,031,529	-		Sama_0846	0.71	+0.2
1,031,543	+		Sama_0846	0.71	+0.1
1,031,543	+		Sama_0846	0.71	-0.5
1,031,544	-		Sama_0846	0.71	-0.4
1,031,602	+		Sama_0846	0.74	-0.5
1,031,602	+		Sama_0846	0.74	-0.4
1,031,603	-		Sama_0846	0.74	+0.3
1,031,740	-		Sama_0846	0.79	+0.3
1,031,768	+		Sama_0846	0.80	-0.2
1,031,768	+		Sama_0846	0.80	-0.3
1,031,768	+		Sama_0846	0.80	-1.1
1,031,768	+		Sama_0846	0.80	-0.1
1,031,768	+		Sama_0846	0.80	-0.8
1,031,768	+		Sama_0846	0.80	-0.2
1,031,769	-		Sama_0846	0.80	-0.3
1,031,769	-		Sama_0846	0.80	-0.4
1,031,769	-		Sama_0846	0.80	+0.3
1,031,769	-		Sama_0846	0.80	-1.2
1,031,813	+		Sama_0846	0.82	+0.5
1,031,813	+		Sama_0846	0.82	+0.0
1,031,814	-		Sama_0846	0.82	-1.1
1,031,814	-		Sama_0846	0.82	+0.5
1,031,814	-		Sama_0846	0.82	+0.5
1,031,840	+		Sama_0846	0.83	+0.6
1,031,840	+		Sama_0846	0.83	+0.7
1,031,841	-		Sama_0846	0.83	+0.5
1,031,841	-		Sama_0846	0.83	-0.0
1,031,841	-		Sama_0846	0.83	+0.9
1,031,894	+		Sama_0846	0.85	+0.0
1,031,895	-		Sama_0846	0.85	-0.1
1,031,961	+		Sama_0846	0.88	+1.0
1,031,972	+		Sama_0846	0.88	-0.0
1,032,078	-				-1.0
1,032,158	+				-1.2
1,032,159	-				+1.2
1,032,159	-				-2.5
1,032,166	-				+0.4
1,032,233	+				-1.7
1,032,233	+				+0.6
1,032,233	+				+0.3
1,032,233	+				+0.1
1,032,234	-				-0.5
1,032,234	-				-0.7
1,032,234	-				-0.5
1,032,236	+				+0.7
1,032,236	+				+1.1
1,032,236	+				+1.2
1,032,237	-				-0.4
1,032,237	-				-0.5
1,032,237	-				+0.6
1,032,344	+				-0.3
1,032,383	+				-0.4
1,032,383	+				+1.0
1,032,448	+				-1.5
1,032,448	+				+0.7
1,032,448	+				-1.4
1,032,449	-				+0.9
1,032,451	+				-0.2
1,032,469	-				+0.2
1,032,510	+				+0.0
1,032,510	+				+1.5
1,032,510	+				-0.8
1,032,510	+				-1.3
1,032,511	-				-1.1
1,032,511	-				+0.2
1,032,511	-				-1.1
1,032,511	-				-0.5
1,032,532	+				+0.7
1,032,630	-				+0.4
1,032,630	-				-0.9
1,032,645	-				+0.0
1,032,697	+				+0.3
1,032,697	+				-0.3
1,032,697	+				-0.8
1,032,698	-				-1.0
1,032,698	-				-0.4
1,032,698	-				-0.4
1,032,698	-				+0.2
1,032,698	-				+1.0
1,032,701	+		Sama_0847	0.10	+0.2
1,032,701	+		Sama_0847	0.10	-1.0
1,032,702	-		Sama_0847	0.10	+0.2
1,032,702	-		Sama_0847	0.10	+1.5
1,032,702	-		Sama_0847	0.10	-0.2
1,032,702	-		Sama_0847	0.10	+0.1
1,032,702	-		Sama_0847	0.10	+0.6
1,032,780	+		Sama_0847	0.14	+1.2
1,032,780	+		Sama_0847	0.14	-0.6
1,032,793	+		Sama_0847	0.15	+0.3
1,032,814	+		Sama_0847	0.16	-0.2
1,032,815	-		Sama_0847	0.16	-1.2
1,032,815	-		Sama_0847	0.16	+2.6
1,032,834	+		Sama_0847	0.16	+0.7
1,032,835	-		Sama_0847	0.17	-0.1
1,032,868	+		Sama_0847	0.18	-1.0
1,033,052	+		Sama_0847	0.27	+0.1
1,033,052	+		Sama_0847	0.27	-0.1
1,033,052	+		Sama_0847	0.27	+0.1
1,033,053	-		Sama_0847	0.27	-2.4
1,033,053	-		Sama_0847	0.27	+0.2
1,033,053	-		Sama_0847	0.27	-0.2
1,033,172	-		Sama_0847	0.33	+0.0
1,033,190	+		Sama_0847	0.33	-0.6
1,033,190	+		Sama_0847	0.33	+0.7
1,033,190	+		Sama_0847	0.33	-1.1
1,033,191	-		Sama_0847	0.33	-0.9
1,033,191	-		Sama_0847	0.33	-1.0
1,033,191	-		Sama_0847	0.33	+0.6
1,033,191	-		Sama_0847	0.33	-0.1
1,033,191	-		Sama_0847	0.33	-0.2
1,033,225	-		Sama_0847	0.35	+0.4