Strain Fitness in Shewanella amazonensis SB2B around Sama_0176

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
204,462	+		Sama_0174	0.63	-0.1
204,504	+		Sama_0174	0.74	-2.1
204,547	+		Sama_0174	0.86	-0.1
204,578	-				-0.7
204,585	+				-1.3
204,595	+				+0.3
204,980	+		Sama_0175	0.52	+0.9
205,078	+		Sama_0175	0.64	-1.7
205,079	-		Sama_0175	0.64	-1.5
205,079	-		Sama_0175	0.64	-1.1
205,189	+		Sama_0175	0.78	+1.2
205,189	+		Sama_0175	0.78	-0.8
205,189	+		Sama_0175	0.78	-0.5
205,189	+		Sama_0175	0.78	-0.1
205,189	+		Sama_0175	0.78	+0.1
205,189	+		Sama_0175	0.78	+1.9
205,189	+		Sama_0175	0.78	-0.3
205,190	-		Sama_0175	0.78	+0.4
205,190	-		Sama_0175	0.78	-0.4
205,190	-		Sama_0175	0.78	+0.2
205,216	+		Sama_0175	0.82	-0.5
205,216	+		Sama_0175	0.82	-0.4
205,395	-				-1.9
205,651	-		Sama_0176	0.30	-1.1
205,864	+		Sama_0176	0.52	+2.5
205,975	+		Sama_0176	0.63	-0.5
205,975	+		Sama_0176	0.63	-0.7
205,975	+		Sama_0176	0.63	-2.3
205,975	+		Sama_0176	0.63	-0.7
205,976	-		Sama_0176	0.63	-0.3
206,176	-		Sama_0176	0.84	-0.7
206,293	-				-1.5
206,314	+				-1.1
206,314	+				-0.9
206,315	-				-0.4
206,342	+				-1.2
206,349	+				+0.8
206,349	+				+0.9
206,349	+				-0.5
206,349	+				-1.3
206,349	+				-1.0
206,349	+				+2.3
206,349	+				+0.5
206,355	+				+0.1
206,355	+				-0.5
206,355	+				+0.7
206,355	+				-0.5
206,355	+				-0.6
206,973	-		Sama_0177	0.49	-1.7
206,973	-		Sama_0177	0.49	-0.7
207,051	+		Sama_0177	0.56	-0.7
207,087	-		Sama_0177	0.59	-0.7
207,309	+		Sama_0177	0.77	-0.1