Strain Fitness in Shewanella oneidensis MR-1 around SO4423

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
4,614,350	+		SO_4422	0.24	-0.7
4,614,386	-		SO_4422	0.27	+0.4
4,614,388	+		SO_4422	0.27	+0.9
4,614,516	+		SO_4422	0.39	-0.6
4,614,605	+		SO_4422	0.46	-0.5
4,614,620	-		SO_4422	0.48	+1.1
4,614,719	+		SO_4422	0.56	+1.2
4,614,719	+		SO_4422	0.56	-0.1
4,614,719	+		SO_4422	0.56	-0.6
4,614,719	+		SO_4422	0.56	-0.7
4,614,727	-		SO_4422	0.57	-0.7
4,614,727	-		SO_4422	0.57	+0.3
4,614,727	-		SO_4422	0.57	+0.7
4,614,727	-		SO_4422	0.57	+0.3
4,614,727	-		SO_4422	0.57	+0.3
4,614,727	-		SO_4422	0.57	-0.6
4,614,727	-		SO_4422	0.57	+0.5
4,614,780	+		SO_4422	0.62	-0.6
4,614,882	-		SO_4422	0.71	-0.6
4,614,955	+		SO_4422	0.77	+0.9
4,614,978	+		SO_4422	0.79	-0.3
4,614,986	-		SO_4422	0.80	-1.3
4,615,069	+		SO_4422	0.87	-0.2
4,615,069	+		SO_4422	0.87	-2.0
4,615,069	+		SO_4422	0.87	-1.9
4,615,069	+		SO_4422	0.87	+0.6
4,615,069	+		SO_4422	0.87	-1.2
4,615,069	+		SO_4422	0.87	+0.1
4,615,077	-		SO_4422	0.88	+0.7
4,615,077	-		SO_4422	0.88	-0.2
4,615,077	-		SO_4422	0.88	-0.9
4,615,077	-		SO_4422	0.88	-0.7
4,615,091	-		SO_4422	0.89	+0.5
4,615,195	+				-0.9
4,615,203	-				-0.5
4,615,203	-				-0.7
4,615,203	-				+0.1
4,615,203	-				-0.6
4,615,292	-				+1.8
4,615,311	-		SO4423	0.20	-1.7
4,615,311	-		SO4423	0.20	+0.3
4,615,412	-				-0.2
4,615,760	+				-0.3
4,615,802	-				+0.3
4,615,827	+				-0.8
4,616,083	+		SO4425	0.22	-0.4
4,616,083	+		SO4425	0.22	-0.3
4,616,083	+		SO4425	0.22	-0.2
4,616,091	-		SO4425	0.22	+0.4
4,616,091	-		SO4425	0.22	+1.4
4,616,091	-		SO4425	0.22	-0.6
4,616,091	-		SO4425	0.22	-0.6
4,616,091	-		SO4425	0.22	+0.9
4,616,091	-		SO4425	0.22	+0.1
4,616,117	-		SO4425	0.24	+0.5
4,616,182	-		SO4425	0.29	+0.2
4,616,185	+		SO4425	0.29	+0.3
4,616,193	-		SO4425	0.30	-1.0
4,616,193	-		SO4425	0.30	+0.7
4,616,228	+		SO4425	0.33	+0.5
4,616,329	+		SO4425	0.40	-1.3
4,616,330	-		SO4425	0.41	-0.5