Strain Fitness in Shewanella oneidensis MR-1 around SO4420

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
4,611,066	-		SO4418	0.45	+0.1
4,611,141	+		SO4418	0.57	-0.5
4,611,236	-		SO4418	0.71	-0.2
4,611,431	-				+0.3
4,611,431	-				+0.1
4,611,476	+				+0.3
4,611,518	-		SO4419	0.15	+2.0
4,611,567	-		SO4419	0.23	-0.2
4,611,613	-		SO4419	0.31	+0.2
4,611,725	-		SO4419	0.50	+0.9
4,611,725	-		SO4419	0.50	-2.5
4,611,774	+		SO4419	0.59	+0.1
4,611,776	+		SO4419	0.59	+0.7
4,611,779	+		SO4419	0.59	-0.9
4,611,782	-		SO4419	0.60	-1.0
4,611,782	-		SO4419	0.60	+0.3
4,611,827	-		SO4419	0.68	-0.7
4,611,828	+		SO4419	0.68	+0.1
4,611,836	-		SO4419	0.69	-2.6
4,611,885	+		SO4419	0.78	-0.0
4,611,893	+		SO4419	0.79	-1.0
4,612,071	+				+0.2
4,612,096	+		SO4420	0.11	-0.4
4,612,096	+		SO4420	0.11	-1.2
4,612,139	+		SO4420	0.20	-1.0
4,612,148	-		SO4420	0.21	+0.3
4,612,189	+		SO4420	0.29	-0.7
4,612,267	-		SO4420	0.45	-1.2
4,612,267	-		SO4420	0.45	-1.7
4,612,267	-		SO4420	0.45	+0.0
4,612,345	+		SO4420	0.60	-0.0
4,612,362	+		SO4420	0.63	-0.4
4,612,370	-		SO4420	0.65	+0.3
4,612,416	+		SO4420	0.74	-2.6
4,612,424	-		SO4420	0.75	-0.2
4,612,576	-		SO4421	0.12	+0.3
4,612,620	-		SO4421	0.36	-1.1
4,612,655	-		SO4421	0.55	-0.3
4,612,674	-		SO4421	0.66	+0.1
4,612,787	-				+0.5
4,612,886	-				+0.3
4,613,076	+				-1.5
4,613,083	+				+0.5
4,613,084	-				+0.9
4,613,084	-				-0.1
4,613,086	-				+0.9
4,613,091	-				-0.4
4,613,353	+		SO4423.1	0.31	+0.1
4,613,402	-		SO4423.1	0.36	-0.4
4,613,421	-		SO4423.1	0.38	+0.1