Strain Fitness in Shewanella oneidensis MR-1 around SO3756

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,901,977	+		SO3754	0.17	-1.3
3,902,032	+		SO3754	0.25	+0.3
3,902,099	-		SO3754	0.36	+0.3
3,902,099	-		SO3754	0.36	-0.5
3,902,099	-		SO3754	0.36	-0.6
3,902,146	+		SO3754	0.43	+1.2
3,902,151	+		SO3754	0.44	-0.2
3,902,159	+		SO3754	0.45	-0.8
3,902,159	+		SO3754	0.45	+0.3
3,902,167	-		SO3754	0.46	-1.1
3,902,198	+		SO3754	0.51	-0.7
3,902,206	-		SO3754	0.52	-3.1
3,902,284	-		SO3754	0.64	+0.4
3,902,289	-		SO3754	0.65	+0.8
3,902,451	+		SO3754	0.90	-0.5
3,902,459	-				+0.2
3,902,499	+				-0.6
3,902,507	-				+0.2
3,902,588	-		SO3755	0.37	+0.3
3,902,601	+		SO3755	0.44	-0.8
3,902,640	+		SO3755	0.66	-0.0
3,902,716	+				+0.3
3,902,740	-				+0.8
3,902,857	+				+0.2
3,902,909	-				+1.2
3,902,932	+				-0.0
3,902,989	+				+0.2
3,902,992	-				-0.5
3,902,997	-				-1.2
3,903,024	-				+0.3
3,903,148	-		SO3756	0.16	-0.8
3,903,165	-		SO3756	0.18	-0.6
3,903,180	+		SO3756	0.19	-0.4
3,903,222	-		SO3756	0.23	+0.2
3,903,228	+		SO3756	0.24	-0.5
3,903,231	-		SO3756	0.24	-0.8
3,903,397	+		SO3756	0.39	+0.5
3,903,405	-		SO3756	0.40	-1.6
3,903,405	-		SO3756	0.40	-0.2
3,903,449	-		SO3756	0.44	-0.8
3,903,460	-		SO3756	0.45	-1.8
3,903,476	+		SO3756	0.47	-0.1
3,903,477	-		SO3756	0.47	+0.2
3,903,570	+		SO3756	0.55	-1.2
3,903,570	+		SO3756	0.55	-1.2
3,903,570	+		SO3756	0.55	-1.0
3,903,570	+		SO3756	0.55	+0.0
3,903,578	-		SO3756	0.56	-1.0
3,903,578	-		SO3756	0.56	+0.3
3,903,578	-		SO3756	0.56	-1.6
3,903,578	-		SO3756	0.56	+0.0
3,903,676	+		SO3756	0.65	+0.2
3,903,684	-		SO3756	0.66	+1.8
3,903,684	-		SO3756	0.66	-0.5
3,903,686	-		SO3756	0.66	-0.4
3,903,695	+		SO3756	0.67	-0.9
3,903,703	-		SO3756	0.68	+0.5
3,903,723	+		SO3756	0.69	+0.4
3,903,731	-		SO3756	0.70	-0.2
3,903,784	-		SO3756	0.75	+1.6
3,903,812	+		SO3756	0.78	-1.0
3,903,824	+		SO3756	0.79	+0.2
3,903,850	+		SO3756	0.81	+0.1
3,903,865	+		SO3756	0.83	-0.1
3,903,939	+		SO3756	0.89	-0.6
3,903,961	+				-0.6
3,903,969	-				+1.5
3,903,969	-				-0.2
3,903,999	+				-0.7
3,904,207	-				+0.2
3,904,442	+	rbcR	SO3757	0.25	+0.0
3,904,442	+	rbcR	SO3757	0.25	-0.5
3,904,442	+	rbcR	SO3757	0.25	-0.8
3,904,450	-	rbcR	SO3757	0.26	+0.0
3,904,497	+	rbcR	SO3757	0.31	-1.5
3,904,505	-	rbcR	SO3757	0.31	+0.0
3,904,507	+	rbcR	SO3757	0.32	+0.5
3,904,507	+	rbcR	SO3757	0.32	+1.2
3,904,510	-	rbcR	SO3757	0.32	-0.8
3,904,515	-	rbcR	SO3757	0.32	+0.6
3,904,524	-	rbcR	SO3757	0.33	+0.3
3,904,873	+	rbcR	SO3757	0.68	-1.1
3,904,900	+	rbcR	SO3757	0.71	+0.8
3,904,936	-	rbcR	SO3757	0.75	+0.5
3,904,952	+	rbcR	SO3757	0.76	-0.5
3,904,955	-	rbcR	SO3757	0.77	-0.2