Strain Fitness in Shewanella oneidensis MR-1 around SO3366

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,508,445	+				+0.4
3,508,514	-				-0.1
3,508,656	-	glsA	SO3365	0.20	-0.8
3,508,742	-	glsA	SO3365	0.30	+0.1
3,508,795	-	glsA	SO3365	0.35	-0.0
3,508,830	+	glsA	SO3365	0.39	-2.4
3,508,833	-	glsA	SO3365	0.40	-0.3
3,508,837	+	glsA	SO3365	0.40	-0.5
3,508,879	+	glsA	SO3365	0.45	+0.3
3,508,908	+	glsA	SO3365	0.48	+1.1
3,508,987	+	glsA	SO3365	0.56	-0.2
3,508,989	+	glsA	SO3365	0.57	-0.2
3,509,219	+	glsA	SO3365	0.82	-0.4
3,509,221	-	glsA	SO3365	0.82	-3.6
3,509,347	-				-0.5
3,509,425	-		SO3366	0.12	-0.6
3,509,451	-		SO3366	0.20	+0.1
3,509,452	+		SO3366	0.20	-1.4
3,509,504	+		SO3366	0.36	+1.3
3,509,512	-				+0.8
3,509,512	-		SO3366	0.39	+0.0
3,509,557	-		SO3366	0.53	-0.0
3,509,778	+				+0.3
3,509,778	+				-0.3
3,509,812	-				+0.5
3,509,819	+				+0.5
3,509,853	+		SO3367	0.13	-0.7
3,509,863	-		SO3367	0.14	-0.5
3,509,866	-		SO3367	0.15	-0.0
3,509,960	-		SO3367	0.28	+0.1
3,510,147	+		SO3367	0.54	+0.6
3,510,331	-		SO3367	0.80	-0.1
3,510,412	+				-0.8
3,510,423	-				-0.1
3,510,645	+				-1.2
3,510,645	+				+1.4
3,510,653	-				+1.2