Strain Fitness in Shewanella oneidensis MR-1 around SO3261

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,395,959	-		SO3259	0.52	+0.6
3,395,993	-		SO3259	0.55	+0.2
3,396,018	+		SO3259	0.57	+1.2
3,396,018	+		SO3259	0.57	+0.4
3,396,026	-		SO3259	0.57	-1.8
3,396,026	-		SO3259	0.57	+0.3
3,396,130	+		SO3259	0.65	+0.3
3,396,130	+		SO3259	0.65	-0.5
3,396,130	+		SO3259	0.65	+1.4
3,396,130	+		SO3259	0.65	-0.2
3,396,138	-		SO3259	0.66	+0.5
3,396,138	-		SO3259	0.66	+0.4
3,396,138	-		SO3259	0.66	-0.2
3,396,138	-		SO3259	0.66	+0.2
3,396,138	-		SO3259	0.66	-0.6
3,396,212	+		SO3259	0.71	-0.4
3,396,220	-		SO3259	0.72	+2.3
3,396,230	-		SO3259	0.73	+0.0
3,396,292	+		SO3259	0.77	+0.0
3,396,445	+		SO3259	0.89	+0.9
3,396,445	+		SO3259	0.89	+0.2
3,396,678	+		SO3260	0.32	-0.1
3,396,678	+		SO3260	0.32	+0.9
3,396,786	-		SO3260	0.72	-0.5
3,396,868	+				+1.0
3,396,901	+				-0.2
3,396,995	+				-1.7
3,396,995	+				-1.6
3,396,995	+				-1.4
3,396,995	+				-1.6
3,397,003	-				-0.6
3,397,051	-		SO3261	0.14	-2.2
3,397,061	-		SO3261	0.15	-0.1
3,397,188	-		SO3261	0.30	-0.9
3,397,214	+		SO3261	0.33	-0.6
3,397,233	-		SO3261	0.35	-2.1
3,397,343	-		SO3261	0.48	-1.4
3,397,405	-		SO3261	0.55	-1.6
3,397,412	+		SO3261	0.55	-0.4
3,397,412	+		SO3261	0.55	-1.5
3,397,499	+		SO3261	0.65	-1.3
3,397,521	-		SO3261	0.68	-1.2
3,397,547	+		SO3261	0.71	-1.1
3,397,620	-		SO3261	0.79	-1.0
3,397,643	+		SO3261	0.82	+0.8
3,397,655	+		SO3261	0.83	-1.6
3,397,722	-				-1.5
3,397,938	-				-1.3
3,397,988	+	ilvB	SO3262	0.11	-1.6
3,398,026	+	ilvB	SO3262	0.13	-1.7
3,398,026	+	ilvB	SO3262	0.13	-1.4
3,398,026	+	ilvB	SO3262	0.13	-2.3
3,398,026	+	ilvB	SO3262	0.13	-0.8
3,398,034	-	ilvB	SO3262	0.13	-0.7
3,398,037	+	ilvB	SO3262	0.14	-2.4
3,398,045	-	ilvB	SO3262	0.14	-0.5
3,398,100	-	ilvB	SO3262	0.17	-1.0
3,398,234	+	ilvB	SO3262	0.25	-1.2
3,398,295	-	ilvB	SO3262	0.28	-1.8
3,398,385	+	ilvB	SO3262	0.34	-0.6
3,398,385	+	ilvB	SO3262	0.34	-1.4
3,398,385	+	ilvB	SO3262	0.34	+0.2
3,398,393	-	ilvB	SO3262	0.34	-0.1
3,398,419	+	ilvB	SO3262	0.35	-0.4
3,398,475	+	ilvB	SO3262	0.39	-1.9
3,398,520	+	ilvB	SO3262	0.41	-1.5
3,398,520	+	ilvB	SO3262	0.41	-1.5
3,398,528	-	ilvB	SO3262	0.42	-0.8
3,398,667	-	ilvB	SO3262	0.50	-0.7
3,398,667	-	ilvB	SO3262	0.50	-2.3
3,398,768	+	ilvB	SO3262	0.55	-1.2
3,398,768	+	ilvB	SO3262	0.55	+0.8
3,398,768	+	ilvB	SO3262	0.55	-1.2
3,398,768	+	ilvB	SO3262	0.55	-2.4
3,398,768	+	ilvB	SO3262	0.55	-0.7
3,398,768	+	ilvB	SO3262	0.55	-3.5
3,398,776	-	ilvB	SO3262	0.56	-2.4
3,398,776	-	ilvB	SO3262	0.56	-2.2
3,398,776	-	ilvB	SO3262	0.56	-1.4
3,398,776	-	ilvB	SO3262	0.56	-1.1
3,398,776	-	ilvB	SO3262	0.56	-1.6
3,398,786	-	ilvB	SO3262	0.56	-1.5