Strain Fitness in Shewanella oneidensis MR-1 around SO2822

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,941,550	-		SO_2820	0.83	-0.2
2,941,597	+				-0.7
2,942,079	-				+0.2
2,942,091	+				-0.4
2,942,174	+		SO2821	0.38	+0.7
2,942,232	+		SO2821	0.61	-0.4
2,942,239	-		SO2821	0.64	-0.2
2,942,376	+				+0.8
2,942,463	-				+0.1
2,942,685	-		SO2822	0.13	-0.1
2,942,685	-		SO2822	0.13	+0.3
2,942,742	-		SO2822	0.17	-0.6
2,942,847	+		SO2822	0.23	-1.0
2,942,913	-		SO2822	0.27	-0.6
2,943,023	-		SO2822	0.34	-0.6
2,943,057	+		SO2822	0.36	-0.9
2,943,104	+		SO2822	0.38	+0.8
2,943,110	-		SO2822	0.39	-0.0
2,943,152	-		SO2822	0.41	-0.2
2,943,187	-		SO2822	0.43	-0.8
2,943,214	-		SO2822	0.45	-0.1
2,943,221	-		SO2822	0.45	-1.0
2,943,281	+		SO2822	0.49	-0.5
2,943,371	+		SO2822	0.54	-0.0
2,943,371	+		SO2822	0.54	-1.6
2,943,376	+		SO2822	0.55	+0.3
2,943,419	+		SO2822	0.57	-0.1
2,943,521	+		SO2822	0.63	+1.4
2,943,746	+		SO2822	0.77	-1.6
2,943,825	+		SO2822	0.81	-0.5
2,943,876	+		SO2822	0.84	-1.7
2,943,955	-		SO2822	0.89	-0.4
2,944,010	-				-1.0
2,944,015	-				+0.2
2,944,254	+		SO2823	0.16	+0.1
2,944,536	+		SO2823	0.56	-0.2
2,944,644	+		SO2823	0.71	+0.2
2,944,721	+		SO2823	0.82	+0.8
2,944,759	+		SO2823	0.87	+1.0
2,944,819	+				+0.3
2,944,881	-				-0.2
2,945,019	+				+1.1
2,945,065	-				-0.1