Strain Fitness in Shewanella oneidensis MR-1 around SO2763

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,884,746	+		SO2762	0.19	+0.4
2,884,810	-		SO2762	0.28	-1.2
2,884,890	-		SO2762	0.39	-1.0
2,884,957	+		SO2762	0.48	-0.1
2,885,340	-				-0.6
2,885,342	+				-1.2
2,885,343	+				-0.6
2,885,361	+				+1.8
2,885,424	-				+0.1
2,885,424	-				+0.1
2,885,430	+				-0.4
2,885,769	+		SO2763	0.13	-0.8
2,885,875	-		SO2763	0.26	+0.3
2,885,983	+		SO2763	0.39	-2.0
2,886,138	+		SO2763	0.58	+0.1
2,886,146	-		SO2763	0.59	-2.0
2,886,147	+		SO2763	0.59	+1.8
2,886,224	-		SO2763	0.69	-1.8
2,886,246	+		SO2763	0.71	-1.6
2,886,246	+		SO2763	0.71	+0.7
2,886,246	+		SO2763	0.71	-0.2
2,886,246	+		SO2763	0.71	-0.2
2,886,254	-		SO2763	0.72	-1.4
2,886,254	-		SO2763	0.72	-0.3
2,886,254	-		SO2763	0.72	-0.8
2,886,281	-		SO2763	0.75	-0.6
2,886,281	-		SO2763	0.75	-0.6
2,886,537	+				+0.5
2,886,545	-				+0.2
2,886,545	-				-0.2
2,886,699	+				+0.3
2,886,733	-				+0.1
2,886,988	+				-0.2
2,886,996	-				+0.2
2,887,245	-				-0.4
2,887,257	-				+0.5
2,887,261	+				-0.1
2,887,261	+				-0.2
2,887,269	-				-0.4
2,887,438	+		SO2766	0.10	+0.3
2,887,461	-		SO2766	0.12	-0.1