Strain Fitness in Shewanella oneidensis MR-1 around SO2698

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,814,932	+		SO2697	0.42	+0.1
2,814,940	+		SO2697	0.42	+0.1
2,814,945	+		SO2697	0.42	-0.1
2,814,948	-		SO2697	0.43	+0.7
2,814,953	-		SO2697	0.43	-0.2
2,815,010	-		SO2697	0.46	+1.0
2,815,056	-		SO2697	0.49	-0.1
2,815,129	-		SO2697	0.53	+1.4
2,815,129	-		SO2697	0.53	-0.4
2,815,148	+		SO2697	0.55	-0.0
2,815,156	-		SO2697	0.55	-1.3
2,815,156	-		SO2697	0.55	+0.1
2,815,156	-		SO2697	0.55	-0.6
2,815,163	+		SO2697	0.56	-0.3
2,815,171	-		SO2697	0.56	-0.1
2,815,171	-		SO2697	0.56	+0.9
2,815,183	+		SO2697	0.57	+0.5
2,815,184	+		SO2697	0.57	-0.3
2,815,185	+		SO2697	0.57	-0.8
2,815,191	+		SO2697	0.57	-0.1
2,815,191	+		SO2697	0.57	+0.7
2,815,191	+		SO2697	0.57	+1.5
2,815,191	+		SO2697	0.57	+0.7
2,815,191	+		SO2697	0.57	-0.0
2,815,191	+		SO2697	0.57	+0.1
2,815,191	+		SO2697	0.57	+0.6
2,815,191	+		SO2697	0.57	+0.6
2,815,192	-		SO2697	0.57	+0.9
2,815,199	-		SO2697	0.58	-0.8
2,815,199	-		SO2697	0.58	-1.0
2,815,199	-		SO2697	0.58	-1.1
2,815,199	-		SO2697	0.58	+1.2
2,815,199	-		SO2697	0.58	+0.5
2,815,199	-		SO2697	0.58	+1.8
2,815,199	-		SO2697	0.58	+0.6
2,815,200	-		SO2697	0.58	-0.0
2,815,225	+		SO2697	0.59	+2.2
2,815,225	+		SO2697	0.59	+1.3
2,815,226	+		SO2697	0.59	-0.8
2,815,232	+		SO2697	0.60	-0.3
2,815,249	+		SO2697	0.61	-0.4
2,815,266	-		SO2697	0.62	+0.8
2,815,277	-		SO2697	0.62	-0.3
2,815,357	-		SO2697	0.67	+0.1
2,815,380	+		SO2697	0.69	+0.8
2,815,402	+		SO2697	0.70	-2.6
2,815,424	-		SO2697	0.71	+0.4
2,815,437	-		SO2697	0.72	+0.1
2,815,575	+		SO2697	0.80	+0.2
2,815,583	-		SO2697	0.81	+0.9
2,815,583	-		SO2697	0.81	+0.0
2,815,590	-		SO2697	0.81	-1.0
2,815,590	-		SO2697	0.81	-0.6
2,815,785	-				+0.3
2,815,843	-				-0.4
2,815,849	-				+0.6
2,815,860	-				-0.6
2,815,945	-				+1.1
2,816,047	-				-0.4
2,816,104	-		SO2698	0.14	+1.2
2,816,140	-		SO2698	0.16	+0.3
2,816,140	-		SO2698	0.16	-0.8
2,816,174	+		SO2698	0.19	+1.1
2,816,182	-		SO2698	0.20	-0.2
2,816,219	-		SO2698	0.22	+0.4
2,816,257	+		SO2698	0.25	+0.2
2,816,265	-		SO2698	0.26	+0.1
2,816,265	-		SO2698	0.26	+0.5
2,816,265	-		SO2698	0.26	-0.2
2,816,275	-		SO2698	0.27	+0.5
2,816,329	-		SO2698	0.31	+0.0
2,816,392	+		SO2698	0.36	-0.7
2,816,400	-		SO2698	0.36	+0.4
2,816,442	-		SO2698	0.39	-0.2
2,816,513	+		SO2698	0.45	+1.0
2,816,518	+		SO2698	0.45	+0.7
2,816,562	+		SO2698	0.49	+0.6
2,816,570	-		SO2698	0.49	-1.2
2,816,582	+		SO2698	0.50	-1.8
2,816,582	+		SO2698	0.50	+0.2
2,816,590	-		SO2698	0.51	+0.6
2,816,622	-		SO2698	0.53	+0.2
2,816,642	-		SO2698	0.55	+1.2
2,816,711	-		SO2698	0.60	-1.0
2,816,718	+		SO2698	0.60	+0.1
2,816,781	-		SO2698	0.65	+0.5
2,816,781	-		SO2698	0.65	+0.1
2,816,804	-		SO2698	0.67	+0.3
2,816,816	+		SO2698	0.68	+0.1
2,816,829	+		SO2698	0.69	+0.8
2,816,837	-		SO2698	0.69	+0.1
2,816,874	-		SO2698	0.72	-0.0
2,816,888	-		SO2698	0.73	+1.6
2,817,096	-		SO2698	0.89	+0.7
2,817,152	-				+1.8
2,817,220	+				-0.4
2,817,228	-				-0.2
2,817,423	-		SO2699	0.17	+1.1
2,817,467	-		SO2699	0.21	-0.3
2,817,632	-		SO2699	0.36	+0.3
2,817,632	-		SO2699	0.36	+0.9
2,817,669	-		SO2699	0.40	-0.4
2,817,695	-		SO2699	0.42	+1.3
2,817,729	+		SO2699	0.45	+1.1
2,817,771	+		SO2699	0.49	-0.4
2,817,823	+		SO2699	0.54	+0.5
2,817,831	-		SO2699	0.55	+1.1
2,817,877	+		SO2699	0.59	+0.4
2,817,948	-		SO2699	0.66	-0.8
2,818,097	+		SO2699	0.79	+2.2
2,818,103	-		SO2699	0.80	+0.4
2,818,123	+		SO2699	0.82	-0.0
2,818,213	+				+0.5