Strain Fitness in Shewanella oneidensis MR-1 around SO2615

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,750,398	-				+1.6
2,750,406	-				+0.6
2,750,552	-		SO2614	0.20	+2.1
2,750,552	-		SO2614	0.20	+1.9
2,750,572	-		SO2614	0.22	+1.3
2,750,598	-		SO2614	0.24	+0.4
2,750,704	-		SO2614	0.35	-1.2
2,751,419	-				-0.8
2,751,419	-				-0.5
2,751,555	-	pabC	SO2615	0.24	-0.2
2,751,734	-	pabC	SO2615	0.46	-1.0
2,751,758	-	pabC	SO2615	0.49	-0.9
2,751,948	-	pabC	SO2615	0.72	-2.0
2,752,526	-	dcd	SO2616	0.60	-2.2
2,753,076	-	udk	SO2617	0.45	+0.1
2,753,143	+	udk	SO2617	0.56	-2.0