Strain Fitness in Shewanella oneidensis MR-1 around SO2610

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,746,330	+		SO2609	0.46	+0.8
2,746,495	-		SO2609	0.58	+0.2
2,746,532	+		SO2609	0.60	-0.0
2,746,807	+		SO2609	0.79	-0.6
2,746,815	-		SO2609	0.80	+0.2
2,747,001	+				-0.8
2,747,049	+				-0.4
2,747,189	-				+0.4
2,747,363	-				+1.0
2,747,382	+				-0.1
2,747,382	+				-0.4
2,747,382	+				+0.0
2,747,382	+				-0.2
2,747,382	+				+0.0
2,747,390	-				+0.8
2,747,392	+				+0.6
2,747,415	+		SO2610	0.11	-1.0
2,747,415	+		SO2610	0.11	-0.4
2,747,415	+		SO2610	0.11	-0.2
2,747,415	+		SO2610	0.11	-0.3
2,747,415	+		SO2610	0.11	-1.0
2,747,423	-		SO2610	0.12	+0.2
2,747,423	-		SO2610	0.12	+0.6
2,747,423	-		SO2610	0.12	-0.4
2,747,423	-		SO2610	0.12	-0.1
2,747,921	+		SO2610	0.75	-0.2
2,747,929	-		SO2610	0.76	-1.0
2,747,962	+		SO2610	0.80	-1.5
2,747,969	-		SO2610	0.81	-1.4
2,748,052	+				-0.4
2,748,052	+				-0.4
2,748,052	+				-0.1
2,748,052	+				+0.6
2,748,052	+				+0.8
2,748,200	-				+0.9
2,748,270	-				-0.2
2,748,415	+				-0.1
2,748,450	-				-0.3
2,748,646	+	pilZ	SO2611	0.61	-0.9
2,748,646	+	pilZ	SO2611	0.61	-1.8