Strain Fitness in Shewanella oneidensis MR-1 around SO2490
Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.008 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,612,443 | + | +2.2 | |||
| 2,612,844 | - | -1.0 | |||
| 2,612,976 | - | -0.4 | |||
| 2,613,043 | + | SO2490 | 0.17 | -2.1 | |
| 2,613,276 | + | SO2490 | 0.44 | +0.6 | |
| 2,613,298 | + | SO2490 | 0.47 | -1.4 | |
| 2,613,632 | + | SO2490 | 0.86 | +0.6 | |
| 2,613,653 | + | SO2490 | 0.89 | -0.9 | |
| 2,613,903 | - | +0.6 | |||
| 2,614,373 | - | pykA | SO2491 | 0.30 | -0.4 |
| 2,614,403 | + | pykA | SO2491 | 0.32 | -1.2 |
| 2,614,563 | - | pykA | SO2491 | 0.44 | +0.6 |
Or see this region's nucleotide sequence