Strain Fitness in Shewanella oneidensis MR-1 around SO2374

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,478,133	+		SO2373	0.31	+0.3
2,478,166	-		SO2373	0.33	-0.6
2,478,191	-		SO2373	0.35	+1.2
2,478,558	+		SO2373	0.64	+0.1
2,478,672	-		SO2373	0.73	-0.7
2,478,721	-		SO2373	0.77	+0.5
2,478,766	+		SO2373	0.81	-0.3
2,478,768	+		SO2373	0.81	+0.9
2,478,768	+		SO2373	0.81	+2.2
2,478,768	+		SO2373	0.81	-1.8
2,478,776	-		SO2373	0.81	-1.4
2,478,801	-		SO2373	0.83	-0.7
2,478,914	-				+0.3
2,478,914	-				-0.3
2,479,039	-				-2.7
2,479,039	-				+0.7
2,479,046	+				-0.2
2,479,123	+				-2.4
2,479,234	-		SO2374	0.12	-0.1
2,479,261	+		SO2374	0.15	-2.2
2,479,374	+		SO2374	0.27	+0.6
2,479,421	+		SO2374	0.32	-0.9
2,479,429	-		SO2374	0.33	-1.2
2,479,429	-		SO2374	0.33	-1.1
2,479,512	+		SO2374	0.43	-0.7
2,479,522	-		SO2374	0.44	-0.4
2,479,533	+		SO2374	0.45	+0.6
2,479,535	-		SO2374	0.45	-0.4
2,479,558	-		SO2374	0.48	-0.6
2,479,566	+		SO2374	0.49	-0.3
2,479,611	+		SO2374	0.53	-1.4
2,479,619	-		SO2374	0.54	+0.2
2,479,695	-		SO2374	0.63	+0.2
2,479,995	-				+0.1
2,480,050	+				-0.4
2,480,058	-				+0.3
2,480,074	+				+2.6
2,480,074	+				+0.0
2,480,074	+				-1.2
2,480,074	+				+0.6
2,480,082	-				+0.7
2,480,082	-				+0.1
2,480,092	-				-0.2
2,480,093	+				-0.6
2,480,093	-				-0.1
2,480,106	-				+1.4
2,480,161	+				-0.3
2,480,293	-				-0.4
2,480,295	-				+0.2
2,480,296	+				-0.3
2,480,394	+		SO2375	0.16	-0.5
2,480,520	+		SO2375	0.35	+0.0
2,480,614	+		SO2375	0.49	+0.5
2,480,652	+		SO2375	0.55	-0.7
2,480,659	-		SO2375	0.56	+0.5
2,480,777	+		SO2375	0.74	+0.1
2,480,787	+		SO2375	0.75	-0.1
2,480,798	+		SO2375	0.77	+0.5
2,480,809	+		SO2375	0.79	-1.1
2,480,809	+		SO2375	0.79	+0.3
2,480,809	+		SO2375	0.79	-1.4
2,480,819	+		SO2375	0.80	+0.0
2,480,856	+		SO2375	0.86	+3.2
2,480,864	-		SO2375	0.87	-0.5
2,480,901	-				-1.0