Strain Fitness in Shewanella oneidensis MR-1 around SO2288

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,401,824	+		SO2286	0.78	-1.0
2,401,832	-		SO2286	0.78	+0.5
2,401,893	+		SO2286	0.82	+1.6
2,401,901	-		SO2286	0.82	+0.1
2,401,927	+		SO2286	0.84	-0.5
2,401,935	-		SO2286	0.84	+0.2
2,402,001	+		SO2286	0.88	-0.4
2,402,055	+				-1.2
2,402,147	-				+0.6
2,402,481	-				-0.2
2,402,481	-				+0.6
2,402,498	+				+0.4
2,402,775	-				+0.6
2,402,776	+				+0.8
2,402,791	-				+0.4
2,402,791	-				+1.6
2,402,853	-				-0.9
2,402,866	-		SO2288	0.12	+0.4
2,402,900	-		SO2288	0.18	+1.2
2,402,903	+		SO2288	0.19	-1.4
2,402,923	-		SO2288	0.23	+0.2
2,402,923	-		SO2288	0.23	-0.1
2,402,956	-		SO2288	0.29	-0.1
2,402,958	+		SO2288	0.29	+0.7
2,402,971	-		SO2288	0.32	+0.9
2,402,999	+		SO2288	0.37	+0.7
2,403,058	+		SO2288	0.49	+0.1
2,403,120	+		SO2288	0.61	-0.6
2,403,138	+		SO2288	0.64	+1.2
2,403,206	-		SO2288	0.77	+1.0
2,403,427	-				+0.8
2,403,485	-				+0.1
2,403,598	+				+0.6
2,403,622	+				-0.4
2,403,688	+				-1.3
2,403,780	+		SO2290	0.18	-0.3
2,403,961	-		SO2290	0.36	+0.7
2,404,007	+		SO2290	0.41	+1.2
2,404,120	+		SO2290	0.52	-1.4
2,404,125	+		SO2290	0.53	-1.0
2,404,211	+		SO2290	0.61	+1.4
2,404,268	+		SO2290	0.67	-0.2
2,404,306	-		SO2290	0.71	+0.6
2,404,324	+		SO2290	0.73	-0.4