Strain Fitness in Shewanella oneidensis MR-1 around SO2213

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
2,325,039	+		SO2213	0.15	-0.4
2,325,073	-		SO2213	0.17	+0.4
2,325,083	-		SO2213	0.18	-0.4
2,325,098	+		SO2213	0.18	-0.6
2,325,106	-		SO2213	0.19	+0.0
2,325,202	-		SO2213	0.25	+0.3
2,325,332	-		SO2213	0.33	+0.9
2,325,344	+		SO2213	0.34	+1.0
2,325,344	+		SO2213	0.34	+0.4
2,325,352	-		SO2213	0.34	-0.0
2,325,487	+		SO2213	0.42	-2.0
2,325,620	+		SO2213	0.51	+0.7
2,325,646	+		SO2213	0.52	+0.1
2,325,646	+		SO2213	0.52	+1.0
2,325,654	-		SO2213	0.53	+1.1
2,325,654	-		SO2213	0.53	-0.1
2,325,674	+		SO2213	0.54	+0.1
2,325,873	-		SO2213	0.66	+0.6
2,326,008	+		SO2213	0.75	+0.3
2,326,176	-		SO2213	0.85	-0.4
2,326,312	+				+0.6
2,326,474	-				-0.7
2,326,695	-		SO2213.1	0.53	-0.2
2,326,726	+		SO2213.1	0.64	-0.2
2,326,861	+				+0.6
2,326,861	+				-0.3
2,326,861	+				+0.7
2,326,869	-				-0.0
2,326,869	-				-0.8
2,326,869	-				-0.4
2,326,923	+		SO_2214	0.15	+0.1
2,326,923	+		SO_2214	0.15	-0.5
2,326,923	+		SO_2214	0.15	+0.3
2,326,923	+		SO_2214	0.15	-0.1
2,326,931	-		SO_2214	0.15	+0.5
2,326,965	-		SO_2214	0.19	+0.9
2,327,001	+		SO_2214	0.22	-0.9
2,327,009	-		SO_2214	0.23	-1.5
2,327,009	-		SO_2214	0.23	-0.0