Strain Fitness in Shewanella oneidensis MR-1 around SOA0062

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
49,429	+		SOA0060	0.75	+1.1
49,429	+		SOA0060	0.75	-0.1
49,429	+		SOA0060	0.75	-0.5
49,429	+		SOA0060	0.75	+1.3
49,429	+		SOA0060	0.75	+0.1
49,430	-		SOA0060	0.76	-1.7
49,432	-		SOA0060	0.76	+1.1
49,437	-		SOA0060	0.77	-0.4
49,437	-		SOA0060	0.77	+1.3
49,462	-		SOA0060	0.82	+0.3
49,462	-		SOA0060	0.82	+0.1
49,493	+		SOA0060	0.88	-0.4
49,493	+		SOA0060	0.88	+0.2
49,505	+		SOA0060	0.90	+0.9
49,556	-				+0.0
49,557	+				-2.1
49,565	-				-1.3
49,565	-				+0.9
49,579	+				+0.7
49,621	+				-0.1
49,621	+				-1.7
49,621	+				-2.0
49,621	+				-2.1
49,629	+				-0.1
49,768	+				+0.6
49,768	+				+0.4
49,768	+				-1.2
49,776	-				-1.1
49,776	-				+0.5
49,776	-				+1.1
49,776	-				+0.9
49,776	-				+0.6
49,776	-				-0.7
49,776	-				-0.1
49,782	-				-0.9
49,801	+				+1.2
49,801	+				-2.3
49,869	-		SOA0061	0.18	+0.5
49,880	-		SOA0061	0.20	-1.6
49,882	+		SOA0061	0.20	-0.7
49,882	+		SOA0061	0.20	-0.8
49,882	+		SOA0061	0.20	+0.7
49,953	+		SOA0061	0.30	-0.6
49,958	+		SOA0061	0.31	+0.7
49,958	+		SOA0061	0.31	+0.2
49,958	+		SOA0061	0.31	-0.1
49,958	+		SOA0061	0.31	-3.2
49,958	+		SOA0061	0.31	-0.5
49,958	+		SOA0061	0.31	+1.1
49,966	-		SOA0061	0.32	-1.8
50,101	-		SOA0061	0.52	+0.9
50,118	+		SOA0061	0.54	+0.9
50,119	-		SOA0061	0.54	+0.8
50,123	+		SOA0061	0.55	-0.6
50,126	-		SOA0061	0.55	-1.2
50,126	-		SOA0061	0.55	+1.7
50,126	-		SOA0061	0.55	-0.2
50,177	-		SOA0061	0.63	-1.2
50,177	-		SOA0061	0.63	+0.9
50,206	-		SOA0061	0.67	+0.5
50,233	+		SOA0061	0.71	-2.4
50,289	+		SOA0061	0.79	-0.2
50,290	+		SOA0061	0.79	+0.4
50,290	+		SOA0061	0.79	+0.5
50,290	+		SOA0061	0.79	+0.9
50,298	-		SOA0061	0.80	-1.0
50,298	-		SOA0061	0.80	+0.1
50,298	-		SOA0061	0.80	-1.1
50,313	-		SOA0061	0.83	+0.2
50,344	+		SOA0061	0.87	-1.6
50,344	+		SOA0061	0.87	+0.3
50,344	+		SOA0061	0.87	+0.5
50,344	+		SOA0061	0.87	+0.9
50,344	+		SOA0061	0.87	-0.5
50,345	-		SOA0061	0.87	+0.7
50,351	+		SOA0061	0.88	-1.0
50,352	-		SOA0061	0.88	-0.8
50,356	+		SOA0061	0.89	+1.1
50,363	+				-0.6
50,371	-				+2.1
50,373	+				-0.0
50,373	+				+0.3
50,373	+				+0.7
50,381	-				+1.0
50,381	-				-0.2
50,381	-				+0.5
50,381	-				-1.7
50,389	-				-0.0
50,410	+				+0.3
50,424	-				+0.8
50,463	-		SOA0062	0.11	-0.1
50,495	-		SOA0062	0.20	-1.3
50,496	+		SOA0062	0.20	-0.5
50,503	+		SOA0062	0.22	-1.8
50,503	+		SOA0062	0.22	-1.5
50,503	+		SOA0062	0.22	-1.3
50,504	+		SOA0062	0.22	-0.5
50,512	-		SOA0062	0.24	-2.0
50,517	+		SOA0062	0.26	-2.5
50,524	-		SOA0062	0.28	-1.5
50,555	+		SOA0062	0.36	-0.2
50,563	-		SOA0062	0.39	-0.9
50,605	+		SOA0062	0.50	+0.3
50,649	+		SOA0062	0.62	+0.2
50,669	+		SOA0062	0.68	+0.1
50,671	-		SOA0062	0.69	-1.6
50,685	-		SOA0062	0.72	-0.9
50,706	-		SOA0062	0.78	-1.8
50,758	-				-1.2
50,795	+				-1.5
50,795	+				+0.9
50,795	-				+0.3
50,796	-				-2.1
50,803	-				+1.1
50,803	-				+1.1
50,829	+				-0.4
50,829	+				-0.1
50,829	+				-2.4
50,829	+				-1.1
50,829	+				+1.1
50,829	+				+0.7
50,837	-				+0.5
50,837	-				+0.4
50,837	-				-1.9
50,837	-				+0.2
50,837	-				-0.1
50,887	-				+0.1
50,887	-				+0.9
50,887	-				+0.5
51,704	-				-0.2