Strain Fitness in Shewanella oneidensis MR-1 around SO4370

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
4,562,843	-		SO4367	0.41	-2.6
4,562,926	+		SO4367	0.51	-0.2
4,562,926	+		SO4367	0.51	-0.8
4,562,928	+		SO4367	0.51	+0.8
4,562,934	-		SO4367	0.52	-1.5
4,562,936	-		SO4367	0.52	+0.5
4,562,936	-		SO4367	0.52	-0.2
4,562,986	+		SO4367	0.58	+0.6
4,563,002	-		SO4367	0.60	+0.2
4,563,183	+		SO4367	0.81	-2.7
4,563,228	+		SO4367	0.86	+1.5
4,563,246	+		SO4367	0.88	+0.3
4,563,451	-		SO4368	0.48	-0.1
4,563,513	+		SO4368	0.73	-1.3
4,563,518	+		SO4368	0.75	+0.1
4,563,537	-		SO4368	0.82	-2.1
4,563,575	+				+0.6
4,563,575	+				-2.4
4,563,583	-				-1.8
4,563,588	-				-2.4
4,563,592	+				-1.6
4,563,677	+		SO4369	0.34	-0.5
4,563,692	-		SO4369	0.40	-0.1
4,563,710	+		SO4369	0.47	-2.9
4,563,710	+		SO4369	0.47	-0.8
4,563,710	+		SO4369	0.47	-1.8
4,563,718	-		SO4369	0.51	-2.3
4,563,718	-		SO4369	0.51	-0.0
4,563,817	+				+0.0
4,563,817	+				-1.7
4,563,835	+				+0.1
4,563,858	-				+0.6
4,563,950	-		SO4370	0.20	-0.9
4,564,078	+		SO4370	0.43	+0.0
4,564,086	-		SO4370	0.45	-0.2
4,564,086	-		SO4370	0.45	-2.3
4,564,102	+		SO4370	0.48	-0.9
4,564,110	-		SO4370	0.49	-0.2
4,564,198	-		SO4370	0.65	-3.1
4,564,328	-		SO4370	0.89	-0.8
4,564,412	+				-2.9
4,564,451	-				+0.4
4,564,451	-				+0.6
4,564,451	-				-0.4
4,564,564	+		SO4371	0.13	+1.4
4,564,581	+		SO4371	0.14	+0.7
4,564,704	+		SO4371	0.23	-2.0
4,564,712	-		SO4371	0.24	-0.6
4,564,712	-		SO4371	0.24	-0.2
4,564,724	+		SO4371	0.25	-1.2
4,564,790	-		SO4371	0.30	-0.6
4,564,807	+		SO4371	0.31	-2.3
4,564,880	+		SO4371	0.36	+1.0
4,564,888	-		SO4371	0.37	+1.0
4,565,007	-		SO4371	0.46	-0.8
4,565,289	-		SO4371	0.66	+1.8
4,565,328	-		SO4371	0.69	-1.8