Strain Fitness in Shewanella oneidensis MR-1 around SO3979

Experiment: Cisplatin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.004 mg/ml
4,114,940	-		SO3978	0.32	+0.2
4,114,995	-		SO3978	0.38	+0.6
4,115,064	+		SO3978	0.46	+0.7
4,115,128	-		SO3978	0.53	-0.6
4,115,165	+		SO3978	0.57	-0.4
4,115,301	-		SO3978	0.72	+0.7
4,115,317	+		SO3978	0.73	-0.3
4,115,344	-		SO3978	0.76	-0.4
4,115,345	-		SO3978	0.76	+1.4
4,115,482	+				+2.0
4,115,490	-				-1.0
4,115,490	-				+0.1
4,115,840	+				+0.8
4,115,852	+				-0.4
4,115,939	-		SO3979	0.31	+0.3
4,115,939	-		SO3979	0.31	+1.4
4,115,967	+		SO3979	0.50	+0.7
4,115,974	-		SO3979	0.55	-0.0
4,116,000	-		SO3979	0.73	+0.3
4,116,000	-		SO3979	0.73	+0.4
4,116,072	-				+0.4
4,116,180	+				-1.0
4,116,187	-				-0.8
4,116,188	-				-0.8
4,116,207	+				-0.5
4,116,316	+				+0.4
4,116,441	+		SO3980	0.17	-0.0
4,116,512	-		SO3980	0.22	-2.1
4,116,650	+		SO3980	0.32	-1.7
4,116,658	-		SO3980	0.32	-0.3
4,116,658	-		SO3980	0.32	+2.0
4,116,658	-		SO3980	0.32	-0.7
4,116,672	+		SO3980	0.33	+0.9
4,116,732	-		SO3980	0.38	-0.6
4,116,787	-		SO3980	0.42	-2.4
4,116,871	+		SO3980	0.48	-0.6
4,116,871	+		SO3980	0.48	-0.0
4,116,871	+		SO3980	0.48	+1.2
4,116,910	-		SO3980	0.50	-1.4